Janjua Safia, William Kainaat, Malik Inayat Ullah, Mehr Javed
a Bioresource Research Centre (BRC) , Islamabad , Pakistan.
b Institute of Natural and Management Sciences (INAM) , Rawalpindi , Pakistan.
Mitochondrial DNA A DNA Mapp Seq Anal. 2017 Jul;28(4):544-546. doi: 10.3109/24701394.2016.1155051. Epub 2016 Mar 18.
Although DNA barcoding is an efficient tool for species identification, however, its efficiency is uncertain for samples having degraded DNA and incomplete isolation/amplification of COI gene fragment (>500 bp). DNA mini-barcoding is a solution to this problem because small DNA fragment of COI genes is used for species identification. Twelve highly processed, chemically treated and finished animal skin (coats, tanned skins) and fur (mufflers) samples, received from the Sindh Wildlife Department, Pakistan, were subjected to DNA mini-barcoding. Eight mufflers belonged to Vulpes vulpes, one coat to Ursus thibetanus, one tanned skin to Lutra sumatrana, and one muffler to Vulpes sp. Origin of only one coat sample remained unidentified, success rate of 92% indicative of the fact that the mini barcoding technique can be used as a substitute of conventional barcoding where full length barcode (∼650 bp Folmer region) cannot be generated.
尽管DNA条形码技术是物种鉴定的有效工具,然而,对于DNA降解以及COI基因片段(>500 bp)分离/扩增不完全的样本,其效率尚不确定。DNA微条形码技术是解决这一问题的方法,因为它使用COI基因的小DNA片段进行物种鉴定。从巴基斯坦信德省野生动物部门收到的12个经过高度加工、化学处理和制成成品的动物皮(外套、鞣制皮)和毛(围巾)样本,进行了DNA微条形码分析。8条围巾属于赤狐,1件外套属于西藏棕熊,1张鞣制皮属于马来亚水獭,1条围巾属于狐属。只有1件外套样本的来源未确定,成功率为92%,这表明在无法生成全长条形码(约650 bp福尔默区域)的情况下,微条形码技术可以替代传统条形码技术。