Department of Environmental Science and Studies, DePaul University, Chicago, Illinois 60614, USA.
National Institute for Mathematical and Biological Synthesis, University of Tennessee, Knoxville, Tennessee 37996-3410, USA.
Sci Data. 2016 May 10;3:160028. doi: 10.1038/sdata.2016.28.
Plants form belowground associations with mycorrhizal fungi in one of the most common symbioses on Earth. However, few large-scale generalizations exist for the structure and function of mycorrhizal symbioses, as the nature of this relationship varies from mutualistic to parasitic and is largely context-dependent. We announce the public release of MycoDB, a database of 4,010 studies (from 438 unique publications) to aid in multi-factor meta-analyses elucidating the ecological and evolutionary context in which mycorrhizal fungi alter plant productivity. Over 10 years with nearly 80 collaborators, we compiled data on the response of plant biomass to mycorrhizal fungal inoculation, including meta-analysis metrics and 24 additional explanatory variables that describe the biotic and abiotic context of each study. We also include phylogenetic trees for all plants and fungi in the database. To our knowledge, MycoDB is the largest ecological meta-analysis database. We aim to share these data to highlight significant gaps in mycorrhizal research and encourage synthesis to explore the ecological and evolutionary generalities that govern mycorrhizal functioning in ecosystems.
植物与菌根真菌形成地下共生关系,这是地球上最常见的共生关系之一。然而,由于这种关系的性质从互利共生到寄生不等,并且在很大程度上取决于上下文,因此对于菌根共生关系的结构和功能很少有大规模的概括。我们宣布发布 MycoDB,这是一个包含 4010 项研究(来自 438 个独特出版物)的数据库,旨在帮助进行多因素元分析,阐明菌根真菌改变植物生产力的生态和进化背景。经过近 80 位合作者 10 年的努力,我们编译了关于植物生物量对菌根真菌接种反应的数据,包括元分析指标和 24 个额外的解释变量,这些变量描述了每项研究的生物和非生物背景。我们还包括数据库中所有植物和真菌的系统发育树。据我们所知,MycoDB 是最大的生态元分析数据库。我们旨在分享这些数据,以突出菌根研究中的显著差距,并鼓励综合研究,以探索控制菌根在生态系统中功能的生态和进化规律。