迟缓瘤胃球菌的黏蛋白降解策略:分子内转唾液酸酶的重要性。

The mucin-degradation strategy of Ruminococcus gnavus: The importance of intramolecular trans-sialidases.

作者信息

Crost Emmanuelle H, Tailford Louise E, Monestier Marie, Swarbreck David, Henrissat Bernard, Crossman Lisa C, Juge Nathalie

机构信息

a Institute of Food Research, The Gut Health and Food Safety Institute Strategic Program, Norwich Research Park , Norwich , United Kingdom.

b The Genome Analysis Center, Norwich Research Park , Norwich , United Kingdom.

出版信息

Gut Microbes. 2016 Jul 3;7(4):302-312. doi: 10.1080/19490976.2016.1186334. Epub 2016 May 25.

Abstract

We previously identified and characterized an intramolecular trans-sialidase (IT-sialidase) in the gut symbiont Ruminococcus gnavus ATCC 29149, which is associated to the ability of the strain to grow on mucins. In this work we have obtained and analyzed the draft genome sequence of another R. gnavus mucin-degrader, ATCC 35913, isolated from a healthy individual. Transcriptomics analyses of both ATCC 29149 and ATCC 35913 strains confirmed that the strategy utilized by R. gnavus for mucin-degradation is focused on the utilization of terminal mucin glycans. R. gnavus ATCC 35913 also encodes a predicted IT-sialidase and harbors a Nan cluster dedicated to sialic acid utilization. We showed that the Nan cluster was upregulated when the strains were grown in presence of mucin. In addition we demonstrated that both R. gnavus strains were able to grow on 2,7-anyhydro-Neu5Ac, the IT-sialidase transglycosylation product, as a sole carbon source. Taken together these data further support the hypothesis that IT-sialidase expressing gut microbes, provide commensal bacteria such as R. gnavus with a nutritional competitive advantage, by accessing and transforming a source of nutrient to their own benefit.

摘要

我们之前在肠道共生菌纤细瘤胃球菌ATCC 29149中鉴定并表征了一种分子内转唾液酸酶(IT-唾液酸酶),该酶与该菌株在黏蛋白上生长的能力有关。在这项研究中,我们获得并分析了从一名健康个体中分离出的另一种能够降解黏蛋白的纤细瘤胃球菌ATCC 35913的基因组草图序列。对ATCC 29149和ATCC 35913菌株的转录组学分析证实,纤细瘤胃球菌用于降解黏蛋白的策略集中在末端黏蛋白聚糖的利用上。纤细瘤胃球菌ATCC 35913也编码一种预测的IT-唾液酸酶,并含有一个专门用于利用唾液酸的Nan簇。我们发现,当菌株在黏蛋白存在的情况下生长时,Nan簇会上调。此外,我们证明这两种纤细瘤胃球菌菌株都能够以IT-唾液酸酶转糖基化产物2,7-脱水神经氨酸作为唯一碳源生长。综合这些数据进一步支持了以下假设:表达IT-唾液酸酶的肠道微生物通过获取并转化营养源以自身受益,从而为诸如纤细瘤胃球菌这样的共生细菌提供营养竞争优势。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f1/4988440/733777c323b2/kgmi-07-04-1186334-g001.jpg

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