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植物信号研究的合成策略:分子工具箱与正交平台。

Synthetic strategies for plant signalling studies: molecular toolbox and orthogonal platforms.

作者信息

Braguy Justine, Zurbriggen Matias D

机构信息

Institute of Synthetic Biology and CEPLAS, University of Düsseldorf, Universitätstrasse 1, Building 26.12.U1.25, Düsseldorf, 40225, Germany.

King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.

出版信息

Plant J. 2016 Jul;87(1):118-38. doi: 10.1111/tpj.13218.

Abstract

Plants deploy a wide array of signalling networks integrating environmental cues with growth, defence and developmental responses. The high level of complexity, redundancy and connection between several pathways hampers a comprehensive understanding of involved functional and regulatory mechanisms. The implementation of synthetic biology approaches is revolutionizing experimental biology in prokaryotes, yeasts and animal systems and can likewise contribute to a new era in plant biology. This review gives an overview on synthetic biology approaches for the development and implementation of synthetic molecular tools and techniques to interrogate, understand and control signalling events in plants, ranging from strategies for the targeted manipulation of plant genomes up to the spatiotemporally resolved control of gene expression using optogenetic approaches. We also describe strategies based on the partial reconstruction of signalling pathways in orthogonal platforms, like yeast, animal and in vitro systems. This allows a targeted analysis of individual signalling hubs devoid of interconnectivity with endogenous interacting components. Implementation of the interdisciplinary synthetic biology tools and strategies is not exempt of challenges and hardships but simultaneously most rewarding in terms of the advances in basic and applied research. As witnessed in other areas, these original theoretical-experimental avenues will lead to a breakthrough in the ability to study and comprehend plant signalling networks.

摘要

植物部署了一系列广泛的信号网络,将环境线索与生长、防御和发育反应整合在一起。多个途径之间高度的复杂性、冗余性和关联性阻碍了我们对其中所涉及的功能和调控机制的全面理解。合成生物学方法的应用正在彻底改变原核生物、酵母和动物系统中的实验生物学,同样也能为植物生物学的新时代做出贡献。本综述概述了合成生物学方法,这些方法用于开发和实施合成分子工具及技术,以探究、理解和控制植物中的信号事件,范围从靶向操纵植物基因组的策略到使用光遗传学方法对基因表达进行时空解析控制。我们还描述了基于在正交平台(如酵母、动物和体外系统)中部分重建信号通路的策略。这使得能够对与内源性相互作用成分没有关联性的单个信号枢纽进行靶向分析。跨学科合成生物学工具和策略的应用并非没有挑战和困难,但同时在基础研究和应用研究的进展方面却极具价值。正如在其他领域所见证的那样,这些新颖的理论 - 实验途径将在研究和理解植物信号网络的能力方面带来突破。

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