Suppr超能文献

利用蛋白质-蛋白质相互作用分析PM2.5与某些疾病之间的关联

The Use of Protein-Protein Interactions for the Analysis of the Associations between PM2.5 and Some Diseases.

作者信息

Zhang Qing, Zhang Pei-Wei, Cai Yu-Dong

机构信息

School of Life Sciences, Shanghai University, Shanghai 200444, China.

Institute of Health Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.

出版信息

Biomed Res Int. 2016;2016:4895476. doi: 10.1155/2016/4895476. Epub 2016 May 8.

Abstract

Nowadays, pollution levels are rapidly increasing all over the world. One of the most important pollutants is PM2.5. It is known that the pollution environment may cause several problems, such as greenhouse effect and acid rain. Among them, the most important problem is that pollutants can induce a number of serious diseases. Some studies have reported that PM2.5 is an important etiologic factor for lung cancer. In this study, we extensively investigate the associations between PM2.5 and 22 disease classes recommended by Goh et al., such as respiratory diseases, cardiovascular diseases, and gastrointestinal diseases. The protein-protein interactions were used to measure the linkage between disease genes and genes that have been reported to be modulated by PM2.5. The results suggest that some diseases, such as diseases related to ear, nose, and throat and gastrointestinal, nutritional, renal, and cardiovascular diseases, are influenced by PM2.5 and some evidences were provided to confirm our results. For example, a total of 18 genes related to cardiovascular diseases are identified to be closely related to PM2.5, and cardiovascular disease relevant gene DSP is significantly related to PM2.5 gene JUP.

摘要

如今,全球污染水平正在迅速上升。最重要的污染物之一是PM2.5。众所周知,污染环境可能会引发一些问题,如温室效应和酸雨。其中,最重要的问题是污染物会诱发多种严重疾病。一些研究报告称,PM2.5是肺癌的一个重要病因。在本研究中,我们广泛调查了PM2.5与Goh等人推荐的22种疾病类别之间的关联,如呼吸系统疾病、心血管疾病和胃肠道疾病。利用蛋白质-蛋白质相互作用来衡量疾病基因与据报道受PM2.5调控的基因之间的联系。结果表明,一些疾病,如与耳、鼻、喉相关的疾病以及胃肠道、营养、肾脏和心血管疾病,受到PM2.5的影响,并提供了一些证据来证实我们的结果。例如,总共确定了18个与心血管疾病相关的基因与PM2.5密切相关,与心血管疾病相关的基因DSP与PM2.5基因JUP显著相关。

相似文献

1
The Use of Protein-Protein Interactions for the Analysis of the Associations between PM2.5 and Some Diseases.
Biomed Res Int. 2016;2016:4895476. doi: 10.1155/2016/4895476. Epub 2016 May 8.
4
Analysis of the relationship between PM2.5 and lung cancer based on protein-protein interactions.
Comb Chem High Throughput Screen. 2016;19(2):100-8. doi: 10.2174/1386207319666151110123345.
5
Ambient Particulate Matter Air Pollution Exposure and Mortality in the NIH-AARP Diet and Health Cohort.
Environ Health Perspect. 2016 Apr;124(4):484-90. doi: 10.1289/ehp.1509676. Epub 2015 Sep 15.
7
Effects of concentrated ambient particles on normal and hypersecretory airways in rats.
Res Rep Health Eff Inst. 2004 Aug(120):1-68; discussion 69-79.
8
Effects of commuting mode on air pollution exposure and cardiovascular health among young adults in Taipei, Taiwan.
Int J Hyg Environ Health. 2015 May;218(3):319-23. doi: 10.1016/j.ijheh.2015.01.003. Epub 2015 Jan 17.
10
Systemic onset juvenile idiopathic arthritis and exposure to fine particulate air pollution.
Clin Exp Rheumatol. 2016 Sep-Oct;34(5):946-952. Epub 2016 Sep 1.

引用本文的文献

2
Effects of Atmospheric Fine Particulate Matter and Its Carrier Microbes on Pulmonary Microecology in Patients with COPD.
Int J Chron Obstruct Pulmon Dis. 2021 Jul 12;16:2049-2063. doi: 10.2147/COPD.S314265. eCollection 2021.
3
Computational-based insights into the phylogeny, structure, and function of alkane-1-monooxygenase.
3 Biotech. 2020 Sep;10(9):391. doi: 10.1007/s13205-020-02388-x. Epub 2020 Aug 14.
4
Computational-based structural, functional and phylogenetic analysis of phytases.
3 Biotech. 2018 Jun;8(6):262. doi: 10.1007/s13205-018-1287-y. Epub 2018 May 19.
6
PM-Induced Oxidative Stress and Mitochondrial Damage in the Nasal Mucosa of Rats.
Int J Environ Res Public Health. 2017 Jan 29;14(2):134. doi: 10.3390/ijerph14020134.

本文引用的文献

1
Mining for novel tumor suppressor genes using a shortest path approach.
J Biomol Struct Dyn. 2016;34(3):664-75. doi: 10.1080/07391102.2015.1042915. Epub 2015 Nov 30.
2
A hybrid computational method for the discovery of novel reproduction-related genes.
PLoS One. 2015 Mar 13;10(3):e0117090. doi: 10.1371/journal.pone.0117090. eCollection 2015.
4
A graphic method for identification of novel glioma related genes.
Biomed Res Int. 2014;2014:891945. doi: 10.1155/2014/891945. Epub 2014 Jun 23.
5
The carcinogenicity of outdoor air pollution.
Lancet Oncol. 2013 Dec;14(13):1262-3. doi: 10.1016/s1470-2045(13)70487-x.
6
The impact of source contribution uncertainty on the effects of source-specific PM2.5 on hospital admissions: a case study in Boston, MA.
J Expo Sci Environ Epidemiol. 2014 Jul;24(4):365-71. doi: 10.1038/jes.2014.7. Epub 2014 Feb 5.
8
Toxicity beyond the lung: connecting PM2.5, inflammation, and diabetes.
Environ Health Perspect. 2014 Jan;122(1):A29. doi: 10.1289/ehp.122-A29.
9
Long-term exposure to PM2.5 and incidence of acute myocardial infarction.
Environ Health Perspect. 2013 Feb;121(2):192-6. doi: 10.1289/ehp.1205284. Epub 2012 Nov 29.
10
STRING v9.1: protein-protein interaction networks, with increased coverage and integration.
Nucleic Acids Res. 2013 Jan;41(Database issue):D808-15. doi: 10.1093/nar/gks1094. Epub 2012 Nov 29.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验