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奇异变形杆菌菌毛相关转录调节因子AtfJ中不同残基对运动抑制和自调节起作用。

Distinct Residues Contribute to Motility Repression and Autoregulation in the Proteus mirabilis Fimbria-Associated Transcriptional Regulator AtfJ.

作者信息

Bode Nadine J, Chan Kun-Wei, Kong Xiang-Peng, Pearson Melanie M

机构信息

Department of Microbiology, New York University Medical Center, New York, New York, USA.

Department of Biochemistry and Molecular Pharmacology, New York University Medical Center, New York, New York, USA.

出版信息

J Bacteriol. 2016 Jul 13;198(15):2100-12. doi: 10.1128/JB.00193-16. Print 2016 Aug 1.

Abstract

UNLABELLED

Proteus mirabilis contributes to a significant number of catheter-associated urinary tract infections, where coordinated regulation of adherence and motility is critical for ascending disease progression. Previously, the mannose-resistant Proteus-like (MR/P) fimbria-associated transcriptional regulator MrpJ has been shown to both repress motility and directly induce the transcription of its own operon; in addition, it affects the expression of a wide range of cellular processes. Interestingly, 14 additional mrpJ paralogs are included in the P. mirabilis genome. Looking at a selection of MrpJ paralogs, we discovered that these proteins, which consistently repress motility, also have nonidentical functions that include cross-regulation of fimbrial operons. A subset of paralogs, including AtfJ (encoded by the ambient temperature fimbrial operon), Fim8J, and MrpJ, are capable of autoinduction. We identified an element of the atf promoter extending from 487 to 655 nucleotides upstream of the transcriptional start site that is responsive to AtfJ, and we found that AtfJ directly binds this fragment. Mutational analysis of AtfJ revealed that its two identified functions, autoregulation and motility repression, are not invariably linked. Residues within the DNA-binding helix-turn-helix domain are required for motility repression but not necessarily autoregulation. Likewise, the C-terminal domain is dispensable for motility repression but is essential for autoregulation. Supported by a three-dimensional (3D) structural model, we hypothesize that the C-terminal domain confers unique regulatory capacities on the AtfJ family of regulators.

IMPORTANCE

Balancing adherence with motility is essential for uropathogens to successfully establish a foothold in their host. Proteus mirabilis uses a fimbria-associated transcriptional regulator to switch between these antagonistic processes by increasing fimbrial adherence while simultaneously downregulating flagella. The discovery of multiple related proteins, many of which also function as motility repressors, encoded in the P. mirabilis genome has raised considerable interest as to their functionality and potential redundancy in this organism. This study provides an important advance in this field by elucidating the nonidentical effects of these paralogs on a molecular level. Our mechanistic studies of one member of this group, AtfJ, shed light on how these differing functions may be conferred despite the limited sequence variety exhibited by the paralogous proteins.

摘要

未标记

奇异变形杆菌导致了大量与导管相关的尿路感染,其中黏附与运动性的协同调节对于上行性疾病进展至关重要。此前已表明,与甘露糖抗性变形杆菌样(MR/P)菌毛相关的转录调节因子MrpJ既能抑制运动性,又能直接诱导其自身操纵子的转录;此外,它还影响多种细胞过程的表达。有趣的是,奇异变形杆菌基因组中还包含另外14个mrpJ旁系同源物。研究一组MrpJ旁系同源物时,我们发现这些始终抑制运动性的蛋白质也具有不同的功能,包括对菌毛操纵子的交叉调节。一部分旁系同源物,包括AtfJ(由环境温度菌毛操纵子编码)、Fim8J和MrpJ,能够自我诱导。我们鉴定出atf启动子中一个位于转录起始位点上游487至655个核苷酸处的元件,它对AtfJ有反应,并且发现AtfJ直接结合该片段。对AtfJ的突变分析表明,其已确定的两种功能,即自我调节和运动性抑制,并非总是相关联的。DNA结合螺旋-转角-螺旋结构域内的残基是运动性抑制所必需的,但不一定是自我调节所必需的。同样,C末端结构域对于运动性抑制是可有可无的,但对于自我调节是必不可少的。在三维(3D)结构模型的支持下,我们推测C末端结构域赋予了AtfJ调节因子家族独特的调节能力。

重要性

对于尿路致病菌而言,平衡黏附与运动性对于在宿主中成功立足至关重要。奇异变形杆菌利用一种与菌毛相关的转录调节因子在这些拮抗过程之间进行切换,通过增加菌毛黏附同时下调鞭毛来实现。奇异变形杆菌基因组中编码的多种相关蛋白质(其中许多也具有运动性抑制功能)的发现,引发了人们对它们在该生物体中的功能和潜在冗余性的极大兴趣。本研究通过在分子水平上阐明这些旁系同源物的不同作用,在该领域取得了重要进展。我们对该组中的一个成员AtfJ的机制研究揭示了,尽管旁系同源蛋白质表现出有限的序列差异,但这些不同的功能是如何赋予的。

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