Joseph Sunitha, Wernery Ulrich, Teng Jade Ll, Wernery Renate, Huang Yi, Patteril Nissy Ag, Chan Kwok-Hung, Elizabeth Shyna K, Fan Rachel Yy, Lau Susanna Kp, Kinne Jörg, Woo Patrick Cy
Central Veterinary Research Laboratory, Dubai, the United Arab Emirates.
Department of Microbiology, The University of Hong Kong, Hong Kong, China.
Emerg Microbes Infect. 2016 Jun 8;5(6):e53. doi: 10.1038/emi.2016.53.
Although antibodies against West Nile virus (WNV) have been detected in the sera of dromedaries in the Middle East, North Africa and Spain, no WNV has been isolated or amplified from dromedary or Bactrian camels. In this study, WNV was isolated from Vero cells inoculated with both nasal swab and pooled trachea/lung samples from a dromedary calf in Dubai. Complete-genome sequencing and phylogenetic analysis using the near-whole-genome polyprotein revealed that the virus belonged to lineage 1a. There was no clustering of the present WNV with other WNVs isolated in other parts of the Middle East. Within lineage 1a, the dromedary WNV occupied a unique position, although it was most closely related to other WNVs of cluster 2. Comparative analysis revealed that the putative E protein encoded by the genome possessed the original WNV E protein glycosylation motif NYS at E154-156, which contained the N-linked glycosylation site at N-154 associated with increased WNV pathogenicity and neuroinvasiveness. In the putative NS1 protein, the A70S substitution observed in other cluster 2 WNVs and P250, which has been implicated in neuroinvasiveness, were present. In addition, the foo motif in the putative NS2A protein, which has been implicated in neuroinvasiveness, was detected. Notably, the amino-acid residues at 14 positions in the present dromedary WNV genome differed from those in most of the closely related WNV strains in cluster 2 of lineage 1a, with the majority of these differences observed in the putative E and NS5 proteins. The present study is the first to demonstrate the isolation of WNV from dromedaries. This finding expands the possible reservoirs of WNV and sources of WNV infection.
尽管在中东、北非和西班牙的单峰驼血清中检测到了抗西尼罗河病毒(WNV)的抗体,但尚未从单峰驼或双峰驼中分离或扩增出WNV。在本研究中,从接种了迪拜一头单峰驼幼崽鼻拭子和气管/肺混合样本的Vero细胞中分离出了WNV。使用近全基因组多聚蛋白进行的全基因组测序和系统发育分析表明,该病毒属于1a谱系。目前的WNV与在中东其他地区分离的其他WNV没有聚类。在1a谱系内,单峰驼WNV占据独特位置,尽管它与第2簇的其他WNV关系最为密切。比较分析显示,基因组编码的推定E蛋白在E位置154 - 156处具有原始的WNV E蛋白糖基化基序NYS,其中N - 154处含有与WNV致病性和神经侵袭性增加相关的N - 连接糖基化位点。在推定的NS1蛋白中,存在在其他第2簇WNV中观察到的A70S替换以及与神经侵袭性有关的P250。此外,在推定的NS2A蛋白中检测到了与神经侵袭性有关的foo基序。值得注意的是,本单峰驼WNV基因组中14个位置的氨基酸残基与1a谱系第2簇中大多数密切相关的WNV菌株不同,这些差异大多数出现在推定的E蛋白和NS5蛋白中。本研究首次证明了从单峰驼中分离出WNV。这一发现扩大了WNV可能的储存宿主和WNV感染源。