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通过随机插入/显性负筛选鉴定黏连蛋白装载亚基Scc4中的功能结构域

Identification of Functional Domains in the Cohesin Loader Subunit Scc4 by a Random Insertion/Dominant Negative Screen.

作者信息

Shwartz Michal, Matityahu Avi, Onn Itay

机构信息

Faculty of Medicine in the Galilee, Bar-Ilan University, Safed, 1311502, Israel.

Faculty of Medicine in the Galilee, Bar-Ilan University, Safed, 1311502, Israel

出版信息

G3 (Bethesda). 2016 Aug 9;6(8):2655-63. doi: 10.1534/g3.116.031674.

DOI:10.1534/g3.116.031674
PMID:27280786
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4978918/
Abstract

Cohesin is a multi-subunit complex that plays an essential role in genome stability. Initial association of cohesin with chromosomes requires the loader-a heterodimer composed of Scc4 and Scc2 However, very little is known about the loader's mechanism of action. In this study, we performed a genetic screen to identify functional domains in the Scc4 subunit of the loader. We isolated scc4 mutant alleles that, when overexpressed, have a dominant negative effect on cell viability. We defined a small region in the N terminus of Scc4 that is dominant negative when overexpressed, and on which Scc2/Scc4 activity depends. When the mutant alleles are expressed as a single copy, they are recessive and do not support cell viability, cohesion, cohesin loading or Scc4 chromatin binding. In addition, we show that the mutants investigated reduce, but do not eliminate, the interaction of Scc4 with either Scc2 or cohesin. However, we show that Scc4 cannot bind cohesin in the absence of Scc2 Our results provide new insight into the roles of Scc4 in cohesin loading, and contribute to deciphering the loading mechanism.

摘要

黏连蛋白是一种多亚基复合体,在基因组稳定性中发挥着至关重要的作用。黏连蛋白与染色体的初始结合需要装载蛋白——一种由Scc4和Scc2组成的异二聚体。然而,关于装载蛋白的作用机制却知之甚少。在本研究中,我们进行了一项遗传筛选,以确定装载蛋白Scc4亚基中的功能结构域。我们分离出了scc4突变等位基因,当这些基因过表达时,会对细胞活力产生显性负效应。我们在Scc4的N端定义了一个小区域,该区域过表达时具有显性负效应,且Scc2/Scc4的活性依赖于此。当突变等位基因以单拷贝形式表达时,它们是隐性的,无法支持细胞活力、黏连、黏连蛋白装载或Scc4与染色质的结合。此外,我们发现所研究的突变体会减少,但不会消除,Scc4与Scc2或黏连蛋白之间的相互作用。然而,我们发现,在没有Scc2的情况下,Scc4无法结合黏连蛋白。我们的研究结果为Scc4在黏连蛋白装载中的作用提供了新的见解,并有助于阐明装载机制。

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Monomeric cohesin state revealed by live-cell single-molecule spectroscopy.活细胞单分子光谱学揭示的单体黏合状态。
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本文引用的文献

1
DNA Entry into and Exit out of the Cohesin Ring by an Interlocking Gate Mechanism.DNA通过联锁门机制进入和离开黏连蛋白环。
Cell. 2015 Dec 17;163(7):1628-40. doi: 10.1016/j.cell.2015.11.030.
2
Structural Studies Reveal the Functional Modularity of the Scc2-Scc4 Cohesin Loader.结构研究揭示了Scc2-Scc4黏连蛋白装载器的功能模块性。
Cell Rep. 2015 Aug 4;12(5):719-25. doi: 10.1016/j.celrep.2015.06.071. Epub 2015 Jul 23.
3
Structural evidence for Scc4-dependent localization of cohesin loading.黏连蛋白装载依赖Scc4定位的结构证据。
Curr Genet. 2020 Apr;66(2):437-443. doi: 10.1007/s00294-019-01034-1. Epub 2019 Sep 18.
4
The chromatin remodeler Chd1 regulates cohesin in budding yeast and humans.染色质重塑因子 Chd1 调节芽殖酵母和人类中的黏连蛋白。
Sci Rep. 2019 Jun 20;9(1):8929. doi: 10.1038/s41598-019-45263-3.
5
A new twist in the coil: functions of the coiled-coil domain of structural maintenance of chromosome (SMC) proteins.螺旋中的新转折:染色体结构维持(SMC)蛋白的卷曲螺旋结构域的功能
Curr Genet. 2018 Feb;64(1):109-116. doi: 10.1007/s00294-017-0735-2. Epub 2017 Aug 23.
Elife. 2015 Jun 3;4:e06057. doi: 10.7554/eLife.06057.
4
A conserved domain in the scc3 subunit of cohesin mediates the interaction with both mcd1 and the cohesin loader complex.黏连蛋白的 scc3 亚基中的保守结构域介导了与 mcd1 和黏连蛋白加载复合物的相互作用。
PLoS Genet. 2015 Mar 6;11(3):e1005036. doi: 10.1371/journal.pgen.1005036. eCollection 2015 Mar.
5
The SMC loader Scc2 regulates gene expression.SMC装载蛋白Scc2调节基因表达。
Cell Cycle. 2015;14(7):943. doi: 10.1080/15384101.2015.1010959.
6
Cohesin's ATPase activity couples cohesin loading onto DNA with Smc3 acetylation.黏连蛋白的ATP酶活性将黏连蛋白加载到DNA上的过程与Smc3乙酰化偶联起来。
Curr Biol. 2014 Oct 6;24(19):2228-37. doi: 10.1016/j.cub.2014.08.011. Epub 2014 Sep 11.
7
The Scc2-Scc4 complex acts in sister chromatid cohesion and transcriptional regulation by maintaining nucleosome-free regions.Scc2-Scc4复合物通过维持无核小体区域,在姐妹染色单体黏连和转录调控中发挥作用。
Nat Genet. 2014 Oct;46(10):1147-51. doi: 10.1038/ng.3080. Epub 2014 Aug 31.
8
The maintenance of chromosome structure: positioning and functioning of SMC complexes.染色体结构的维持:SMC 复合物的定位和功能。
Nat Rev Mol Cell Biol. 2014 Sep;15(9):601-14. doi: 10.1038/nrm3857.
9
ROCC, a conserved region in cohesin's Mcd1 subunit, is essential for the proper regulation of the maintenance of cohesion and establishment of condensation.ROCC是黏连蛋白Mcd1亚基中的一个保守区域,对于黏连维持和凝聚建立的适当调控至关重要。
Mol Biol Cell. 2014 Aug 15;25(16):2351-64. doi: 10.1091/mbc.E14-04-0929. Epub 2014 Jun 25.
10
Cell cycle-specific cleavage of Scc2 regulates its cohesin deposition activity.细胞周期特异性切割 Scc2 调节其黏连蛋白沉积活性。
Proc Natl Acad Sci U S A. 2014 May 13;111(19):7060-5. doi: 10.1073/pnas.1321722111. Epub 2014 Apr 28.