Arakel Eric C, Richter Kora P, Clancy Anne, Schwappach Blanche
Department of Molecular Biology, Universitätsmedizin Göttingen, 37073 Goettingen, Germany;
Department of Molecular Biology, Universitätsmedizin Göttingen, 37073 Goettingen, Germany; Max Planck Institute for Biophysical Chemistry, 37077 Goettingen, Germany
Proc Natl Acad Sci U S A. 2016 Jun 21;113(25):6916-21. doi: 10.1073/pnas.1603544113. Epub 2016 Jun 13.
Membrane recruitment of coatomer and formation of coat protein I (COPI)-coated vesicles is crucial to homeostasis in the early secretory pathway. The conformational dynamics of COPI during cargo capture and vesicle formation is incompletely understood. By scanning the length of δ-COP via functional complementation in yeast, we dissect the domains of the δ-COP subunit. We show that the μ-homology domain is dispensable for COPI function in the early secretory pathway, whereas the N-terminal longin domain is essential. We map a previously uncharacterized helix, C-terminal to the longin domain, that is specifically required for the retrieval of HDEL-bearing endoplasmic reticulum-luminal residents. It is positionally analogous to an unstructured linker that becomes helical and membrane-facing in the open form of the AP2 clathrin adaptor complex. Based on the amphipathic nature of the critical helix it may probe the membrane for lipid packing defects or mediate interaction with cargo and thus contribute to stabilizing membrane-associated coatomer.
外套膜蛋白复合物的膜募集及衣被蛋白I(COPI)包被囊泡的形成对于早期分泌途径的稳态至关重要。目前对于COPI在货物捕获和囊泡形成过程中的构象动力学还不完全清楚。通过在酵母中进行功能互补扫描δ-COP的长度,我们剖析了δ-COP亚基的结构域。我们发现,μ-同源结构域对于早期分泌途径中COPI的功能是可有可无的,而N端的长链结构域是必不可少的。我们绘制了一个位于长链结构域C端的先前未表征的螺旋结构,它是回收带有HDEL的内质网腔驻留蛋白所特需的。它在位置上类似于AP2网格蛋白衔接复合物开放形式中变成螺旋状并面向膜的无结构连接子。基于关键螺旋的两亲性,它可能探测膜上的脂质堆积缺陷或介导与货物的相互作用,从而有助于稳定与膜相关的外套膜蛋白复合物。