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疣孢链霉菌新种,从海洋沉积物中分离得到。

Streptomyces verrucosisporus sp. nov., isolated from marine sediments.

作者信息

Phongsopitanun Wongsakorn, Kudo Takuji, Ohkuma Moriya, Pittayakhajonwut Pattama, Suwanborirux Khanit, Tanasupawat Somboon

机构信息

Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand.

Japan Collection of Microorganisms, RIKEN BioResource Center, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.

出版信息

Int J Syst Evol Microbiol. 2016 Sep;66(9):3607-3613. doi: 10.1099/ijsem.0.001240. Epub 2016 Jun 14.

Abstract

Five actinomycete isolates, CPB1-1T, CPB2-10, BM1-4, CPB3-1 and CPB1-18, belonging to the genus Streptomyces were isolated from marine sediments collected from Chumphon Province, Thailand. They produced open loops of warty spore chains on aerial mycelia. ll-Diaminopimelic acid, glucose and ribose were found in their whole-cell hydrolysates. Polar lipids found were diphosphatidylglycerol, phosphatidylethanolamine, lysophosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol and phosphatidylinositol mannoside. Menaquinones were MK-9(H6), MK-9(H8), MK-10(H6) and MK-10(H8). Major cellular fatty acids were anteiso-C15 : 0, anteiso-C17 : 0 and iso-C16 : 0. The taxonomic position of the strains was described using a polyphasic approach. blastn analysis of the 16S rRNA gene sequence revealed that these five strains exhibited the highest similarities with 'Streptomyces mangrovicola' GY1 (99.0 %), Streptomyces fenghuangensisGIMN4.003T (98.6 %), Streptomyces barkulensisRC 1831T (98.5 %) and Streptomyces radiopugnans R97T (98.3 %). However, their phenotypic characteristics and 16S rRNA gene sequences as well as DNA-DNA relatedness differentiated these five strains from the other species of the genus Streptomyces. Here, we propose the novel actinomycetes all being representatives of the same novel species, Streptomyces verrucosisporus, with type strain CPB1-1T (=JCM 18519T=PCU 343T=TISTR 2344T).

摘要

从泰国春蓬府采集的海洋沉积物中分离出五株属于链霉菌属的放线菌,分别为CPB1-1T、CPB2-10、BM1-4、CPB3-1和CPB1-18。它们在气生菌丝体上产生带疣状孢子链的开环。在其全细胞水解产物中发现了ll-二氨基庚二酸、葡萄糖和核糖。发现的极性脂质有双磷脂酰甘油、磷脂酰乙醇胺、溶血磷脂酰乙醇胺、磷脂酰甘油、磷脂酰肌醇和磷脂酰肌醇甘露糖苷。甲基萘醌为MK-9(H6)、MK-9(H8)、MK-10(H6)和MK-10(H8)。主要细胞脂肪酸为anteiso-C15 : 0、anteiso-C17 : 0和iso-C16 : 0。采用多相分类法描述了这些菌株的分类地位。对16S rRNA基因序列进行blastn分析表明,这五株菌株与“红树林链霉菌”GY1(99.0 %)、凤凰链霉菌GIMN4.003T(98.6 %)、巴库链霉菌RC 1831T(98.5 %)和放射抗性链霉菌R97T(98.3 %)表现出最高的相似性。然而,它们的表型特征、16S rRNA基因序列以及DNA-DNA相关性将这五株菌株与链霉菌属的其他物种区分开来。在此,我们提出这些新的放线菌均为同一新物种疣状孢子链霉菌的代表,模式菌株为CPB1-1T(=JCM 18519T=PCU 343T=TISTR 2344T)。

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