Department of Biology, Faculty of Art and Science, Ondokuz Mayis University, 55139 Kurupelit-Samsun, Turkey.
Anadolu University, Faculty of Science, Biology Department, 26470, Eskişehir, Turkey.
Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3126-3133. doi: 10.1099/ijs.0.062216-0. Epub 2014 Jun 18.
The taxonomic positions of two novel actinomycetes, designated strains BNT558(T) and SM3501(T), were established by using a polyphasic approach. The organisms had chemical and morphological features that were consistent with their classification in the genus Streptomyces. The whole-cell hydrolysates of the two strains contained ll-diaminopimelic acid as the diagnostic diamino acid. The predominant menaquinones were MK-9(H6) and MK-9(H8) for strain BNT558(T) and MK-9(H8) and MK-9(H6) for strain SM3501(T). Major fatty acids of the strains were anteiso-C15 : 0, anteiso-C17 : 0 and iso-C16 : 0. The polar lipid profile of strain BNT558(T) contained diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, one unidentified glycolipid and one unidentified aminophospholipid, while that of strain SM3501(T) consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, phosphatidylethanolamine, three unidentified atypical aminolipids, one unidentified aminolipid and two unidentified glycolipids. The G+C contents of the genomic DNA were 70.2 and 69.6 mol% for strains BNT558(T) and SM3501(T), respectively. 16S rRNA gene sequence data supported the classification of the isolates in the genus Streptomyces and showed that they formed two distinct branches within the genus. Based on almost-complete 16S rRNA gene sequences, strain BNT558(T) was related most closely to Streptomyces albiaxialis NRRL B-24327(T) and strain SM3501(T) was related most closely to Streptomyces cacaoi subsp. cacaoi NBRC 12748(T). DNA-DNA relatedness between each of the isolates and its closest phylogenetic neighbours showed that they belonged to distinct species. The two isolates were readily distinguished from one another and from the type strains of the other species classified in the genus Streptomyces based on a combination of phenotypic and genotypic properties. Based on the genotypic and phenotypic evidence, strains BNT558(T) and SM3501(T) belong to two novel species in the genus Streptomyces, for which the names Streptomyces iconiensis sp. nov. (type strain BNT558(T) = KCTC 29198(T) = DSM 42109(T)) and Streptomyces smyrnaeus sp. nov. (type strain SM3501(T) = KCTC 29214(T) = DSM 42105(T)) are proposed, respectively.
两株新型放线菌菌株 BNT558(T) 和 SM3501(T) 的分类地位通过多相分类方法确定。这些生物的化学和形态特征与其在链霉菌属中的分类一致。两株菌的全细胞水解物均含有 ll-二氨基庚二酸作为诊断二氨基庚二酸。菌株 BNT558(T) 的主要类异戊二烯醌为 MK-9(H6) 和 MK-9(H8),而菌株 SM3501(T) 的主要类异戊二烯醌为 MK-9(H8) 和 MK-9(H6)。两株菌的主要脂肪酸为 anteiso-C15:0、anteiso-C17:0 和 iso-C16:0。菌株 BNT558(T) 的极性脂谱含有二磷脂酰甘油、磷脂酰乙醇胺、磷脂酰肌醇、一种未鉴定的糖脂和一种未鉴定的氨基磷脂,而菌株 SM3501(T) 的极性脂谱含有二磷脂酰甘油、磷脂酰甘油、磷脂酰肌醇、磷脂酰乙醇胺、三种未鉴定的非典型氨基脂、一种未鉴定的氨基脂和两种未鉴定的糖脂。菌株 BNT558(T) 和 SM3501(T) 的基因组 DNA 的 G+C 含量分别为 70.2mol%和 69.6mol%。16S rRNA 基因序列数据支持这些分离株在链霉菌属中的分类,并表明它们在属内形成两个不同的分支。基于近乎完整的 16S rRNA 基因序列,菌株 BNT558(T) 与 Streptomyces albiaxialis NRRL B-24327(T) 最为密切相关,而菌株 SM3501(T) 与 Streptomyces cacaoi subsp. cacaoi NBRC 12748(T) 最为密切相关。每个分离株与其最接近的系统发育近缘种之间的 DNA-DNA 相关性表明,它们属于不同的种。这两个分离株在表型和基因型特征的结合基础上,彼此之间以及与其他在链霉菌属中分类的种的模式株很容易区分开来。基于基因型和表型证据,菌株 BNT558(T) 和 SM3501(T) 属于链霉菌属中的两个新种,分别命名为 Streptomyces iconiensis sp. nov.(模式菌株 BNT558(T) = KCTC 29198(T) = DSM 42109(T))和 Streptomyces smyrnaeus sp. nov.(模式菌株 SM3501(T) = KCTC 29214(T) = DSM 42105(T))。