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高致病性A(H5N1)禽流感病毒传播的野生鸟类风险因素的空间建模

Spatial Modeling of Wild Bird Risk Factors for Highly Pathogenic A(H5N1) Avian Influenza Virus Transmission.

作者信息

Prosser Diann J, Hungerford Laura L, Erwin R Michael, Ottinger Mary Ann, Takekawa John Y, Newman Scott H, Xiao Xiangming, Ellis Erle C

机构信息

Patuxent Wildlife Research Center, U.S. Geological Survey, Beltsville, MD 20705.

University of Maryland School of Medicine, Baltimore, MD 21201.

出版信息

Avian Dis. 2016 May;60(1 Suppl):329-36. doi: 10.1637/11125-050615-Reg.

Abstract

One of the longest-persisting avian influenza viruses in history, highly pathogenic avian influenza virus (HPAIV) A(H5N1), continues to evolve after 18 yr, advancing the threat of a global pandemic. Wild waterfowl (family Anatidae) are reported as secondary transmitters of HPAIV and primary reservoirs for low-pathogenic avian influenza viruses, yet spatial inputs for disease risk modeling for this group have been lacking. Using geographic information software and Monte Carlo simulations, we developed geospatial indices of waterfowl abundance at 1 and 30 km resolutions and for the breeding and wintering seasons for China, the epicenter of H5N1. Two spatial layers were developed: cumulative waterfowl abundance (WAB), a measure of predicted abundance across species, and cumulative abundance weighted by H5N1 prevalence (WPR), whereby abundance for each species was adjusted based on prevalence values and then totaled across species. Spatial patterns of the model output differed between seasons, with higher WAB and WPR in the northern and western regions of China for the breeding season and in the southeast for the wintering season. Uncertainty measures indicated highest error in southeastern China for both WAB and WPR. We also explored the effect of resampling waterfowl layers from 1 to 30 km resolution for multiscale risk modeling. Results indicated low average difference (less than 0.16 and 0.01 standard deviations for WAB and WPR, respectively), with greatest differences in the north for the breeding season and southeast for the wintering season. This work provides the first geospatial models of waterfowl abundance available for China. The indices provide important inputs for modeling disease transmission risk at the interface of poultry and wild birds. These models are easily adaptable, have broad utility to both disease and conservation needs, and will be available to the scientific community for advanced modeling applications.

摘要

高致病性禽流感病毒A(H5N1)是历史上持续时间最长的禽流感病毒之一,历经18年仍在不断演变,加剧了全球大流行的威胁。野生水禽(鸭科)被报道为高致病性禽流感病毒的二次传播者和低致病性禽流感病毒的主要宿主,但针对该群体的疾病风险建模的空间数据一直缺乏。利用地理信息软件和蒙特卡洛模拟,我们在中国(H5N1的发源地)开发了1公里和30公里分辨率下、繁殖季和越冬季的水禽丰度地理空间指数。我们构建了两个空间图层:累计水禽丰度(WAB),这是一个跨物种预测丰度的指标;以及根据H5N1流行率加权的累计丰度(WPR),即每个物种的丰度根据流行率值进行调整,然后跨物种求和。模型输出的空间模式在不同季节有所不同,繁殖季中国北部和西部地区的WAB和WPR较高,越冬季东南部地区较高。不确定性测量表明,中国东南部地区的WAB和WPR误差最高。我们还探讨了将水禽图层从1公里分辨率重采样到30公里分辨率对多尺度风险建模的影响。结果表明平均差异较小(WAB和WPR分别小于0.16和0.01个标准差),繁殖季北部和越冬季东南部差异最大。这项工作提供了中国首个可用的水禽丰度地理空间模型。这些指数为模拟家禽和野生鸟类界面的疾病传播风险提供了重要数据。这些模型易于调整,对疾病和保护需求都有广泛用途,并将提供给科学界用于高级建模应用。

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