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细菌休眠在淡水湖泊中比在高盐湖泊中更为普遍。

Bacterial Dormancy Is More Prevalent in Freshwater than Hypersaline Lakes.

作者信息

Aanderud Zachary T, Vert Joshua C, Lennon Jay T, Magnusson Tylan W, Breakwell Donald P, Harker Alan R

机构信息

Department of Plant and Wildlife Sciences, Brigham Young University Provo, UT, USA.

Department of Microbiology and Molecular Biology, Brigham Young University Provo, UT, USA.

出版信息

Front Microbiol. 2016 Jun 9;7:853. doi: 10.3389/fmicb.2016.00853. eCollection 2016.

DOI:10.3389/fmicb.2016.00853
PMID:27375575
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4899617/
Abstract

Bacteria employ a diverse array of strategies to survive under extreme environmental conditions but maintaining these adaptations comes at an energetic cost. If energy reserves drop too low, extremophiles may enter a dormant state to persist. We estimated bacterial dormancy and identified the environmental variables influencing our activity proxy in 10 hypersaline and freshwater lakes across the Western United States. Using ribosomal RNA:DNA ratios as an indicator for bacterial activity, we found that the proportion of the community exhibiting dormancy was 16% lower in hypersaline than freshwater lakes. Based on our indicator variable multiple regression results, saltier conditions in both freshwater and hypersaline lakes increased activity, suggesting that salinity was a robust environmental filter structuring bacterial activity in lake ecosystems. To a lesser degree, higher total phosphorus concentrations reduced dormancy in all lakes. Thus, even under extreme conditions, the competition for resources exerted pressure on activity. Within the compositionally distinct and less diverse hypersaline communities, abundant taxa were disproportionately active and localized in families Microbacteriaceae (Actinobacteria), Nitriliruptoraceae (Actinobacteria), and Rhodobacteraceae (Alphaproteobacteria). Our results are consistent with the view that hypersaline communities are able to capitalize on a seemingly more extreme, yet highly selective, set of conditions and finds that extremophiles may need dormancy less often to thrive and survive.

摘要

细菌采用多种策略在极端环境条件下生存,但维持这些适应性需要付出能量代价。如果能量储备降得过低,嗜极菌可能会进入休眠状态以维持生存。我们估算了美国西部10个高盐度湖和淡水湖中的细菌休眠情况,并确定了影响我们活动指标的环境变量。以核糖体RNA:DNA比率作为细菌活性的指标,我们发现高盐度湖中表现出休眠的群落比例比淡水湖低16%。根据我们的指标变量多元回归结果,淡水湖和高盐度湖中的更咸条件都增加了活性,这表明盐度是构建湖泊生态系统中细菌活性的一个强大环境筛选因素。在较小程度上,较高的总磷浓度降低了所有湖泊中的休眠情况。因此,即使在极端条件下,对资源的竞争也对活性施加了压力。在组成不同且多样性较低的高盐度群落中,丰富的分类群活动不成比例地高,并且集中在微杆菌科(放线菌)、腈裂解菌科(放线菌)和红杆菌科(α-变形菌)中。我们的结果与以下观点一致,即高盐度群落能够利用一组看似更极端但具有高度选择性的条件,并发现嗜极菌可能较少需要休眠来茁壮成长和生存。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/4ebcda1b0179/fmicb-07-00853-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/9464a9eb6c44/fmicb-07-00853-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/f60c5d08b7ef/fmicb-07-00853-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/30dd8279e539/fmicb-07-00853-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/f6fdf9c6bc9f/fmicb-07-00853-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/82178e17f637/fmicb-07-00853-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/4ebcda1b0179/fmicb-07-00853-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/9464a9eb6c44/fmicb-07-00853-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/f60c5d08b7ef/fmicb-07-00853-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/30dd8279e539/fmicb-07-00853-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/f6fdf9c6bc9f/fmicb-07-00853-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/82178e17f637/fmicb-07-00853-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87c0/4899617/4ebcda1b0179/fmicb-07-00853-g006.jpg

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