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基于具有总变差正则化的相干局部强度聚类的磁共振图像分割与偏置场估计。

MR image segmentation and bias field estimation based on coherent local intensity clustering with total variation regularization.

作者信息

Tu Xiaoguang, Gao Jingjing, Zhu Chongjing, Cheng Jie-Zhi, Ma Zheng, Dai Xin, Xie Mei

机构信息

School of Communication and Information Engineering, University of Electronic Science and Technology of China, Chengdu, 611731, Sichuan, China.

School of Electronic Engineering, University of Electronic Science and Technology of China, Chengdu, 611731, Sichuan, China.

出版信息

Med Biol Eng Comput. 2016 Dec;54(12):1807-1818. doi: 10.1007/s11517-016-1540-7. Epub 2016 Jul 4.

DOI:10.1007/s11517-016-1540-7
PMID:27376641
Abstract

Though numerous segmentation algorithms have been proposed to segment brain tissue from magnetic resonance (MR) images, few of them consider combining the tissue segmentation and bias field correction into a unified framework while simultaneously removing the noise. In this paper, we present a new unified MR image segmentation algorithm whereby tissue segmentation, bias correction and noise reduction are integrated within the same energy model. Our method is presented by a total variation term introduced to the coherent local intensity clustering criterion function. To solve the nonconvex problem with respect to membership functions, we add auxiliary variables in the energy function such as Chambolle's fast dual projection method can be used and the optimal segmentation and bias field estimation can be achieved simultaneously throughout the reciprocal iteration. Experimental results show that the proposed method has a salient advantage over the other three baseline methods on either tissue segmentation or bias correction, and the noise is significantly reduced via its applications on highly noise-corrupted images. Moreover, benefiting from the fast convergence of the proposed solution, our method is less time-consuming and robust to parameter setting.

摘要

尽管已经提出了许多分割算法来从磁共振(MR)图像中分割脑组织,但其中很少有算法考虑将组织分割和偏置场校正结合到一个统一的框架中,同时去除噪声。在本文中,我们提出了一种新的统一MR图像分割算法,该算法将组织分割、偏置校正和噪声降低集成在同一个能量模型中。我们的方法通过引入到相干局部强度聚类准则函数中的全变差项来表示。为了解决关于隶属函数的非凸问题,我们在能量函数中添加辅助变量,这样就可以使用Chambolle的快速对偶投影方法,并通过交替迭代同时实现最优分割和偏置场估计。实验结果表明,所提出的方法在组织分割或偏置校正方面相对于其他三种基线方法具有显著优势,并且通过将其应用于高噪声图像,噪声得到了显著降低。此外,受益于所提出解决方案的快速收敛,我们的方法耗时更少且对参数设置具有鲁棒性。

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本文引用的文献

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Med Biol Eng Comput. 2015 Jan;53(1):23-35. doi: 10.1007/s11517-014-1198-y. Epub 2014 Oct 11.
2
Non-locally regularized segmentation of multiple sclerosis lesion from multi-channel MRI data.基于多通道MRI数据的多发性硬化病变非局部正则化分割
Magn Reson Imaging. 2014 Oct;32(8):1058-66. doi: 10.1016/j.mri.2014.03.006. Epub 2014 Apr 24.
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Multiplicative intrinsic component optimization (MICO) for MRI bias field estimation and tissue segmentation.
用于MRI偏置场估计和组织分割的乘法固有成分优化(MICO)
Magn Reson Imaging. 2014 Sep;32(7):913-23. doi: 10.1016/j.mri.2014.03.010. Epub 2014 Apr 30.
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Automatic segmentation of brain MR images using an adaptive balloon snake model with fuzzy classification.使用具有模糊分类的自适应气球蛇模型自动分割脑磁共振图像。
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Automatic segmentation of the fetal cerebellum on ultrasound volumes, using a 3D statistical shape model.基于三维统计形状模型的超声容积图像中胎儿小脑的自动分割。
Med Biol Eng Comput. 2013 Sep;51(9):1021-30. doi: 10.1007/s11517-013-1082-1. Epub 2013 May 18.
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Comput Med Imaging Graph. 2011 Jul;35(5):383-97. doi: 10.1016/j.compmedimag.2010.12.001. Epub 2011 Jan 22.
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DRAMMS: Deformable registration via attribute matching and mutual-saliency weighting.DRAMMS:基于属性匹配和互显著度加权的可变形配准。
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