Christmann Romy B, Wooten Alicia, Sampaio-Barros Percival, Borges Claudia L, Carvalho Carlos R R, Kairalla Ronaldo A, Feghali-Bostwick Carol, Ziemek Jessica, Mei Yu, Goummih Salma, Tan Jiangning, Alvarez Diana, Kass Daniel J, Rojas Mauricio, de Mattos Thiago Lemos, Parra Edwin, Stifano Giuseppina, Capelozzi Vera L, Simms Robert W, Lafyatis Robert
Boston University School of Medicine, E501, Arthritis Center, Medical Campus, 72 East Concord Street, Boston, MA, 02118-2526, USA.
Hospital das Clinicas da Faculdade de Medicina da Universidade de São Paulo, São Paulo, SP, Brazil.
Arthritis Res Ther. 2016 Jul 5;18(1):155. doi: 10.1186/s13075-016-1054-6.
MicroRNA (miRNA) control key elements of mRNA stability and likely contribute to the dysregulated lung gene expression observed in systemic sclerosis associated interstitial lung disease (SSc-ILD). We analyzed the miRNA gene expression of tissue and cells from patients with SSc-ILD. A chronic lung fibrotic murine model was used.
RNA was isolated from lung tissue of 12 patients with SSc-ILD and 5 controls. High-resolution computed tomography (HRCT) was performed at baseline and 2-3 years after treatment. Lung fibroblasts and peripheral blood mononuclear cells (PBMC) were isolated from healthy controls and patients with SSc-ILD. miRNA and mRNA were analyzed by microarray, quantitative polymerase chain reaction, and/or Nanostring; pathway analysis was performed by DNA Intelligent Analysis (DIANA)-miRPath v2.0 software. Wild-type and miR-155 deficient (miR-155ko) mice were exposed to bleomycin.
Lung miRNA microarray data distinguished patients with SSc-ILD from healthy controls with 185 miRNA differentially expressed (q < 0.25). DIANA-miRPath revealed 57 Kyoto Encyclopedia of Genes and Genomes pathways related to the most dysregulated miRNA. miR-155 and miR-143 were strongly correlated with progression of the HRCT score. Lung fibroblasts only mildly expressed miR-155/miR-21 after several stimuli. miR-155 PBMC expression strongly correlated with lung function tests in SSc-ILD. miR-155ko mice developed milder lung fibrosis, survived longer, and weaker lung induction of several genes after bleomycin exposure compared to wild-type mice.
miRNA are dysregulated in the lungs and PBMC of patients with SSc-ILD. Based on mRNA-miRNA interaction analysis and pathway tools, miRNA may play a role in the progression of the disease. Our findings suggest that targeting miR-155 might provide a novel therapeutic strategy for SSc-ILD.
微小RNA(miRNA)控制信使核糖核酸(mRNA)稳定性的关键要素,可能与系统性硬化症相关间质性肺病(SSc-ILD)中观察到的肺部基因表达失调有关。我们分析了SSc-ILD患者组织和细胞中的miRNA基因表达情况。使用了慢性肺纤维化小鼠模型。
从12例SSc-ILD患者和5例对照者的肺组织中分离RNA。在基线及治疗后2至3年进行高分辨率计算机断层扫描(HRCT)。从健康对照者和SSc-ILD患者中分离肺成纤维细胞和外周血单核细胞(PBMC)。通过微阵列、定量聚合酶链反应和/或纳米串分析miRNA和mRNA;通过DNA智能分析(DIANA)-miRPath v2.0软件进行通路分析。将野生型和miR-155缺陷(miR-155ko)小鼠暴露于博来霉素。
肺miRNA微阵列数据可区分SSc-ILD患者和健康对照者,有185种miRNA差异表达(q < 0.25)。DIANA-miRPath显示57条京都基因与基因组百科全书通路与失调最严重的miRNA相关。miR-155和miR-143与HRCT评分进展密切相关。经多种刺激后,肺成纤维细胞仅轻度表达miR-155/miR-21。SSc-ILD患者中miR-155在PBMC中的表达与肺功能测试密切相关。与野生型小鼠相比,miR-155ko小鼠发生的肺纤维化较轻,存活时间更长,博来霉素暴露后肺部几种基因的诱导作用较弱。
SSc-ILD患者的肺和PBMC中miRNA失调。基于mRNA-miRNA相互作用分析和通路工具,miRNA可能在疾病进展中起作用。我们的研究结果表明,靶向miR-155可能为SSc-ILD提供一种新的治疗策略。