Praveckova Martina, Brennerova Maria V, Holliger Christof, De Alencastro Felippe, Rossi Pierre
Laboratory of Molecular Genetics of Bacteria, Institute of Microbiology, Academy of Sciences of the Czech RepublicPrague, Czech Republic; Faculty of Science, Charles University PraguePrague, Czech Republic.
Laboratory of Molecular Genetics of Bacteria, Institute of Microbiology, Academy of Sciences of the Czech Republic Prague, Czech Republic.
Front Microbiol. 2016 Jun 16;7:933. doi: 10.3389/fmicb.2016.00933. eCollection 2016.
Although polychlorinated biphenyls (PCBs) production was brought to a halt 30 years ago, recalcitrance to degradation makes them a major environmental pollutant at a global scale. Previous studies confirmed that organohalide-respiring bacteria (OHRB) were capable of utilizing chlorinated congeners as electron acceptor. OHRB belonging to the Phyla Chloroflexi and Firmicutes are nowadays considered as the main PCB-dechlorinating organisms. In this study, we aimed at exploring the involvement of other taxa in PCB dechlorination using sediment-free microcosms (SFMs) and the Delor PCB mixture. High rates of congener dehalogenation (up to 96%) were attained in long-term incubations of up to 692 days. Bacterial communities were dominated by Chloroflexi, Proteobacteria, and Firmicutes, among strictly simplified community structures composed of 12 major phyla only. In a first batch of SFMs, Dehalococcoides mccartyi closely affiliated with strains CG4 and CBDB1 was considered as the main actor associated with congener dehalogenation. Addition of 2-bromoethanesulfonate (BES), a known inhibitor of methanogenic activity in a second batch of SFMs had an adverse effect on the abundance of Dehalococcoides sp. Only two sequences affiliated to this Genus could be detected in two (out of six) BES-treated SFMs, contributing to a mere 0.04% of the communities. BES-treated SFMs showed very different community structures, especially in the contributions of organisms involved in fermentation and syntrophic activities. Indirect evidence provided by both statistical and phylogenetic analysis validated the implication of a new cluster of actors, distantly affiliated with the Family Geobacteraceae (Phylum δ-Proteobacteria), in the dehalogenation of low chlorinated PCB congeners. Members of this Family are known already for their dehalogenation capacity of chlorinated solvents. As a result, the present study widens the knowledge for the phylogenetic reservoir of indigenous PCB dechlorinating taxa.
尽管多氯联苯(PCBs)的生产在30年前就已停止,但因其难降解性,使其成为全球范围内的主要环境污染物。先前的研究证实,有机卤呼吸细菌(OHRB)能够利用氯化同系物作为电子受体。如今,属于绿弯菌门和厚壁菌门的OHRB被认为是主要的多氯联苯脱氯生物。在本研究中,我们旨在使用无沉积物微宇宙(SFMs)和德洛多氯联苯混合物,探索其他分类群在多氯联苯脱氯中的作用。在长达692天的长期培养中,同系物脱卤率很高(高达96%)。细菌群落以绿弯菌门、变形菌门和厚壁菌门为主,在仅由12个主要门类组成的严格简化群落结构中。在第一批SFMs中,与菌株CG4和CBDB1密切相关的麦氏嗜卤球菌被认为是与同系物脱卤相关的主要作用者。在第二批SFMs中添加已知的产甲烷活性抑制剂2-溴乙烷磺酸盐(BES),对嗜卤球菌属的丰度产生了不利影响。在六个经BES处理的SFMs中,只有两个检测到属于该属的序列,仅占群落的0.04%。经BES处理的SFMs显示出非常不同的群落结构,特别是在参与发酵和互营活动的生物体的贡献方面。统计分析和系统发育分析提供的间接证据证实,一个与地杆菌科(δ-变形菌门)远缘相关的新的作用者群落在低氯多氯联苯同系物的脱卤中发挥了作用。该科成员因其对氯化溶剂的脱卤能力而闻名。因此,本研究拓宽了对本地多氯联苯脱氯分类群系统发育库的认识。