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基于肽重组VP6蛋白的酶免疫测定法检测多种宿主物种中的A组轮状病毒

Peptide-Recombinant VP6 Protein Based Enzyme Immunoassay for the Detection of Group A Rotaviruses in Multiple Host Species.

作者信息

Kumar Naveen, Malik Yashpal Singh, Kumar Satish, Sharma Kuldeep, Sircar Subhankar, Saurabh Sharad, Gulati Baldev R, Singh Neeraj, Singh Arvind Kumar, Joshi Vinay G, Banyai Krisztian, Dhama Kuldeep

机构信息

Biological Standardization Division, Indian Veterinary Research Institute (IVRI), Izatnagar, Uttar Pradesh, India.

Division of Animal Biotechnology, Indian Veterinary Research Institute (IVRI), Izatnagar, Uttar Pradesh, India.

出版信息

PLoS One. 2016 Jul 8;11(7):e0159027. doi: 10.1371/journal.pone.0159027. eCollection 2016.

Abstract

We developed a novel enzyme immunoassay for the detection of group A rotavirus (RVA) antigen in fecal samples of multiple host species. The assay is based on the detection of conserved VP6 protein using anti-recombinant VP6 antibodies as capture antibodies and anti-multiple antigenic peptide (identified and constructed from highly immunodominant epitopes within VP6 protein) antibodies as detector antibodies. The clinical utility of the assay was evaluated using a panel of 914 diarrhoeic fecal samples from four different host species (bovine, porcine, poultry and human) collected from diverse geographical locations in India. Using VP6- based reverse transcription-polymerase chain reaction (RT-PCR) as the gold standard, we found that the diagnostic sensitivity (DSn) and specificity (DSp) of the new assay was high [bovine (DSn = 94.2% & DSp = 100%); porcine (DSn = 94.6% & DSp = 93.3%); poultry (DSn = 74.2% & DSp = 97.7%) and human (DSn = 82.1% & DSp = 98.7%)]. The concordance with RT-PCR was also high [weighted kappa (k) = 0.831-0.956 at 95% CI = 0.711-1.0] as compared to RNA-polyacrylamide gel electrophoresis (RNA-PAGE). The performance characteristics of the new immunoassay were comparable to those of the two commercially available ELISA kits. Our results suggest that this peptide-recombinant protein based assay may serve as a preliminary assay for epidemiological surveillance of RVA antigen and for evaluation of vaccine effectiveness especially in low and middle income settings.

摘要

我们开发了一种新型酶免疫测定法,用于检测多种宿主物种粪便样本中的A组轮状病毒(RVA)抗原。该测定法基于使用抗重组VP6抗体作为捕获抗体以及抗多种抗原肽(从VP6蛋白内高度免疫显性表位鉴定并构建)抗体作为检测抗体来检测保守的VP6蛋白。使用从印度不同地理位置收集的来自四种不同宿主物种(牛、猪、家禽和人类)的914份腹泻粪便样本评估了该测定法的临床实用性。以基于VP6的逆转录聚合酶链反应(RT-PCR)作为金标准,我们发现新测定法的诊断敏感性(DSn)和特异性(DSp)很高[牛(DSn = 94.2% & DSp = 100%);猪(DSn = 94.6% & DSp = 93.3%);家禽(DSn = 74.2% & DSp = 97.7%)和人类(DSn = 82.1% & DSp = 98.7%)]。与RNA聚丙烯酰胺凝胶电泳(RNA-PAGE)相比,与RT-PCR的一致性也很高[加权kappa(k)= 0.831 - 0.956,95%置信区间 = 0.711 - 1.0]。新免疫测定法的性能特征与两种市售ELISA试剂盒相当。我们的结果表明,这种基于肽 - 重组蛋白的测定法可作为RVA抗原流行病学监测和疫苗效果评估的初步测定法,特别是在低收入和中等收入环境中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d64c/4938596/a5467fb491c9/pone.0159027.g001.jpg

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Candidate new rotavirus species in sheltered dogs, Hungary.
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Review of group A rotavirus strains reported in swine and cattle.
Vet Microbiol. 2013 Aug 30;165(3-4):190-9. doi: 10.1016/j.vetmic.2013.03.020. Epub 2013 Apr 4.
7
Receiver operating characteristic curve analysis, sensitivity comparison and individual difference.
Clin Radiol. 2012 Sep;67(9):940. doi: 10.1016/j.crad.2012.04.002. Epub 2012 May 17.
8
VP6-sequence-based cutoff values as a criterion for rotavirus species demarcation.
Arch Virol. 2012 Jun;157(6):1177-82. doi: 10.1007/s00705-012-1273-3. Epub 2012 Mar 20.
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Protective effect of natural rotavirus infection in an Indian birth cohort.
N Engl J Med. 2011 Jul 28;365(4):337-46. doi: 10.1056/NEJMoa1006261.

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