Methner D Nicole R, Scherer Steven E, Welch Katherine, Walkiewicz Magdalena, Eng Christine M, Belmont John W, Powell Mark C, Korchina Viktoriya, Doddapaneni Harsha Vardhan, Muzny Donna M, Gibbs Richard A, Wolf Dwayne A, Sanchez Luis A, Kahn Roger
Harris County Institute of Forensic Sciences, Houston, Texas 77054, USA;
Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas 77030, USA;
Genome Res. 2016 Sep;26(9):1170-7. doi: 10.1101/gr.195800.115. Epub 2016 Jul 19.
Each year in the United States, thousands of cases of sudden and unexpected deaths of infants, children, and young adults are assigned an undetermined cause of death after postmortem investigation and autopsy. Heritable genetic variants have been suggested as the cause of up to a third of sudden death (SD) cases. Elucidation of the genetic variants involved in SD cases is important to not only help establish cause and manner of death of these individuals, but to also aid in determining whether familial genetic testing should be considered. Previously, these types of postmortem screenings have not been a feasible option for most county medical examiners' and coroners' offices. We sequenced full exons of 64 genes associated with SD in the largest known cohort (351) of infant and young SD decedents using massively parallel sequencing at <$600 per sample. Genetic variants were assessed through literature review and clinical evaluation by a multidisciplinary consortium of experts. Thirteen individuals (3.7%), eight infants (2.8% of those <1 yr of age) and five children/young adults (7.0% of those >1 yr of age), were found to have a reportable genetic variant contributing to SD. These percentages represent an estimate lower than those previously reported. Overall yields and results likely vary between studies due to differences in evaluation techniques and reporting. Additionally, we recommend ongoing assessment of data, including nonreported novel variants, as technology and literature continually advance. This study demonstrates a strategy to implement molecular autopsies in medicolegal investigations of young SD decedents.
在美国,每年都有数千例婴儿、儿童和青年的突然意外死亡案例,在尸检调查和解剖后死因仍无法确定。据推测,遗传性基因变异是高达三分之一的猝死(SD)案例的病因。阐明与SD案例相关的基因变异不仅对于帮助确定这些个体的死因和死亡方式很重要,而且对于协助确定是否应考虑进行家族基因检测也很重要。以前,对于大多数县法医办公室和验尸官办公室来说,这类尸检筛查并非可行的选择。我们使用大规模平行测序技术,以每个样本低于600美元的成本,对已知最大队列(351例)的婴儿和青年SD死者中与SD相关的64个基因的全部外显子进行了测序。基因变异通过一个多学科专家联盟进行文献综述和临床评估。发现13人(3.7%),8名婴儿(1岁以下婴儿中的2.8%)和5名儿童/青年(1岁以上儿童/青年中的7.0%)有可报告的导致SD的基因变异。这些百分比代表的估计值低于先前报告的数值。由于评估技术和报告方式的差异,不同研究的总体产出和结果可能有所不同。此外,随着技术和文献的不断发展,我们建议持续评估数据,包括未报告的新变异。这项研究展示了一种在年轻SD死者的法医学调查中实施分子尸检的策略。