Lee Linda, Zhang Ye, Ozar Brittany, Sensen Christoph W, Schriemer David C
Department of Biochemistry and Molecular Biology and the Southern Alberta Cancer Research Institute, University of Calgary , Calgary, Alberta T2N 4N1, Canada.
Institute of Molecular Biotechnology, Graz University of Technology , Graz 8010, Austria.
J Proteome Res. 2016 Sep 2;15(9):3108-17. doi: 10.1021/acs.jproteome.6b00224. Epub 2016 Aug 1.
Plants belonging to the genus Nepenthes are carnivorous, using specialized pitfall traps called "pitchers" that attract, capture, and digest insects as a primary source of nutrients. We have used RNA sequencing to generate a cDNA library from the Nepenthes pitchers and applied it to mass spectrometry-based identification of the enzymes secreted into the pitcher fluid using a nonspecific digestion strategy superior to trypsin in this application. This first complete catalog of the pitcher fluid subproteome includes enzymes across a variety of functional classes. The most abundant proteins present in the secreted fluid are proteases, nucleases, peroxidases, chitinases, a phosphatase, and a glucanase. Nitrogen recovery involves a particularly rich complement of proteases. In addition to the two expected aspartic proteases, we discovered three novel nepenthensins, two prolyl endopeptidases that we name neprosins, and a putative serine carboxypeptidase. Additional proteins identified are relevant to pathogen-defense and secretion mechanisms. The full complement of acid-stable enzymes discovered in this study suggests that carnivory in the genus Nepenthes can be sustained by plant-based mechanisms alone and does not absolutely require bacterial symbiosis.
猪笼草属植物是食肉植物,它们利用一种特殊的陷阱——称为“捕虫笼”——来吸引、捕获并消化昆虫,将其作为主要营养来源。我们利用RNA测序技术从猪笼草的捕虫笼中生成了一个cDNA文库,并将其应用于基于质谱的捕虫笼液中分泌酶的鉴定,采用了一种在该应用中优于胰蛋白酶的非特异性消化策略。这个捕虫笼液亚蛋白质组的首个完整目录包含了各种功能类别的酶。分泌液中含量最丰富的蛋白质是蛋白酶、核酸酶、过氧化物酶、几丁质酶、一种磷酸酶和一种葡聚糖酶。氮的回收涉及特别丰富的蛋白酶。除了两种预期的天冬氨酸蛋白酶外,我们还发现了三种新的猪笼草蛋白酶、两种我们命名为猪笼草内肽酶的脯氨酰内肽酶以及一种假定的丝氨酸羧肽酶。鉴定出的其他蛋白质与病原体防御和分泌机制有关。本研究中发现的完整的酸稳定酶表明,猪笼草属植物的食肉特性仅靠植物自身机制就能维持,并不绝对需要细菌共生。