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利用连续注射和错配修复缺陷小鼠提高ENU诱变效率

Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice.

作者信息

Gallego-Llamas Jabier, Timms Andrew E, Pitstick Rose, Peters Janet, Carlson George A, Beier David R

机构信息

Center for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, United States of America.

Department of Pediatrics, University of Washington School of Medicine, Seattle, WA, United States of America.

出版信息

PLoS One. 2016 Jul 21;11(7):e0159377. doi: 10.1371/journal.pone.0159377. eCollection 2016.

DOI:10.1371/journal.pone.0159377
PMID:27441645
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4956170/
Abstract

ENU mutagenesis is a powerful method for generating novel lines of mice that are informative with respect to both fundamental biological processes and human disease. Rapid developments in genomic technology have made the task of identifying causal mutations by positional cloning remarkably efficient. One limitation of this approach remains the mutation frequency achievable using standard treatment protocols, which currently generate approximately 1-2 sequence changes per megabase when optimized. In this study we used two strategies to attempt to increase the number of mutations induced by ENU treatment. One approach employed mice carrying a mutation in the DNA repair enzyme Msh6. The second strategy involved injection of ENU to successive generations of mice. To evaluate the number of ENU-induced mutations, single mice or pooled samples were analyzed using whole exome sequencing. The results showed that there is considerable variability in the induced mutation frequency using these approaches, but an overall increase in ENU-induced variants from one generation to another was observed. The analysis of the mice deficient for Msh6 also showed an increase in the ENU-induced variants compared to the wild-type ENU-treated mice. However, in both cases the increase in ENU-induced mutation frequency was modest.

摘要

ENU诱变是一种强大的方法,可用于培育新型小鼠品系,这些品系对于基础生物学过程和人类疾病都具有参考价值。基因组技术的快速发展使得通过定位克隆鉴定因果突变的任务变得非常高效。这种方法的一个局限性仍然是使用标准治疗方案可实现的突变频率,目前优化后每兆碱基大约产生1-2个序列变化。在本研究中,我们使用了两种策略来尝试增加ENU处理诱导的突变数量。一种方法是使用携带DNA修复酶Msh6突变的小鼠。第二种策略是将ENU注射到连续几代小鼠中。为了评估ENU诱导的突变数量,使用全外显子组测序分析单个小鼠或混合样本。结果表明,使用这些方法诱导的突变频率存在相当大的变异性,但观察到从一代到另一代ENU诱导的变异总体上有所增加。对缺乏Msh6的小鼠的分析还表明,与野生型ENU处理的小鼠相比,ENU诱导的变异有所增加。然而,在这两种情况下,ENU诱导的突变频率增加幅度都不大。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90f0/4956170/54df2bef165a/pone.0159377.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90f0/4956170/03279e68ec0c/pone.0159377.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90f0/4956170/8dd7257a91af/pone.0159377.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90f0/4956170/54df2bef165a/pone.0159377.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90f0/4956170/03279e68ec0c/pone.0159377.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90f0/4956170/8dd7257a91af/pone.0159377.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/90f0/4956170/54df2bef165a/pone.0159377.g003.jpg

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本文引用的文献

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