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野油菜黄单胞菌野油菜致病变种分泌的一种主要内切葡聚糖酶的生物物理和生化研究。

Biophysical and biochemical studies of a major endoglucanase secreted by Xanthomonas campestris pv. campestris.

作者信息

Rosseto Flávio Rodolfo, Manzine Livia Regina, de Oliveira Neto Mario, Polikarpov Igor

机构信息

Instituto de Física de São Carlos, Universidade de São Paulo, Avenida Trabalhador São Carlense 400-Centro, São Carlos-SP 13560-970, Brazil.

Instituto de Biociências, Universidade Estadual Paulista, Distrito de Rubião Jr. s/n, Botucatu-SP 18618-970, Brazil.

出版信息

Enzyme Microb Technol. 2016 Sep;91:1-7. doi: 10.1016/j.enzmictec.2016.05.007. Epub 2016 May 21.

Abstract

Endoglucanases are the main cellulolytic enzymes secreted by the bacterium Xanthomonas campestris pv. campestris (Xcc). The major endoglucanase exported by this bacterium into an external milieu is an enzyme XccCel5A, which belongs to GH5 family subfamily 1 and is encoded by the gene engXCA. We purified XccCel5A using ammonium sulfate precipitation followed by size exclusion chromatography and identified it by zymogram analysis. Circular dichroism and fluorescence spectroscopy studies showed that XccCel5A is stable in a wide pH range and up to about 55°C and denatures at the higher temperatures. The optimal conditions for enzyme activity were identified as T=45°C and pH=7.0. Under the optimum conditions the catalytic efficiency (kcat/KM) of the enzyme was determined as 5.16×10(4)s(-1)M(-1) using carboxymethylcellulose (CMC) as a substrate. Our SAXS studies revealed extended tadpole-shape molecular assembly, typical for cellulases, and allowed to determine an overall shape of the enzyme and a relative position of the catalytic and cellulose binding domains.

摘要

内切葡聚糖酶是野油菜黄单胞菌野油菜致病变种(Xcc)分泌的主要纤维素分解酶。该细菌分泌到胞外环境中的主要内切葡聚糖酶是一种XccCel5A酶,它属于糖基水解酶5(GH5)家族第1亚家族,由engXCA基因编码。我们先用硫酸铵沉淀法,再通过尺寸排阻色谱法纯化了XccCel5A,并通过酶谱分析对其进行了鉴定。圆二色光谱和荧光光谱研究表明,XccCel5A在较宽的pH范围内以及高达约55°C时都很稳定,在更高温度下会变性。确定该酶的最佳活性条件为温度T = 45°C,pH = 7.0。在最佳条件下,以羧甲基纤维素(CMC)为底物测定该酶的催化效率(kcat/KM)为5.16×10(4)s(-1)M(-1)。我们的小角X射线散射(SAXS)研究揭示了纤维素酶典型的延长蝌蚪状分子组装结构,并得以确定该酶的整体形状以及催化结构域和纤维素结合结构域的相对位置。

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