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编码野油菜黄单胞菌野油菜致病变种主要内切葡聚糖酶的engXCA基因的核苷酸序列。

Nucleotide sequence of the engXCA gene encoding the major endoglucanase of Xanthomonas campestris pv. campestris.

作者信息

Gough C L, Dow J M, Keen J, Henrissat B, Daniels M J

机构信息

John Innes Institute, Norwich, U.K.

出版信息

Gene. 1990 Apr 30;89(1):53-9. doi: 10.1016/0378-1119(90)90205-6.

DOI:10.1016/0378-1119(90)90205-6
PMID:2373365
Abstract

The nucleotide sequence of the gene (engXCA) encoding the major extracellular endoglucanase (ENGXCA) of the phytopathogenic bacterium Xanthomonas campestris pv. campestris (X. c. campestris) was determined and compared with the N-terminal amino acid (aa) sequence of the purified enzyme. An open reading frame of 1479 bp encoding 493 aa was identified, of which the N-terminal 25 aa represent a potential signal peptide. Determination of the exact position of a Tn5 insertion within engXCA, which did not reduce the encoded enzyme activity, indicated that the C-terminal region of the protein is not crucial for ENGXCA activity. Comparison of the complete deduced aa sequence with those deduced from other endoglucanase- and exoglucanase-encoding genes revealed a region with a high degree of homology, located towards the C terminus of the protein. These data indicate that the X. c. campestris ENGXCA may have a domain structure similar to that of many other bacterial and fungal cellulolytic enzymes. Hydrophobic cluster analysis was performed on the deduced aa sequence. Comparison of this analysis with those of 30 other cellulase sequences belonging to six different families indicated that the X. c. campestris enzyme can be classified in family A. The two aa residues which had previously been identified as 'potentially catalytic' within this family of cellulases, are conserved in the X. c. campestris ENGXCA.

摘要

测定了植物致病细菌野油菜黄单胞菌野油菜致病变种(X. c. campestris)中编码主要胞外内切葡聚糖酶(ENGXCA)的基因(engXCA)的核苷酸序列,并将其与纯化酶的N端氨基酸(aa)序列进行了比较。鉴定出一个1479 bp的开放阅读框,编码493个氨基酸,其中N端的25个氨基酸代表一个潜在的信号肽。确定engXCA内Tn5插入的确切位置,该插入不降低编码酶的活性,表明该蛋白的C端区域对ENGXCA活性并不关键。将完整推导的氨基酸序列与从其他内切葡聚糖酶和外切葡聚糖酶编码基因推导的序列进行比较,发现该蛋白C端有一个高度同源的区域。这些数据表明,X. c. campestris ENGXCA可能具有与许多其他细菌和真菌纤维素分解酶相似的结构域结构。对推导的氨基酸序列进行了疏水簇分析。将该分析结果与属于六个不同家族的其他30个纤维素酶序列的分析结果进行比较,表明X. c. campestris酶可归类为A家族。在该纤维素酶家族中先前被鉴定为“潜在催化”的两个氨基酸残基在X. c. campestris ENGXCA中是保守的。

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