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野油菜黄单胞菌野油菜致病变种主要胞外内切葡聚糖酶催化结构域的结晶及初步衍射分析

Crystallization and preliminary diffraction analysis of the catalytic domain of major extracellular endoglucanase from Xanthomonas campestris pv. campestris.

作者信息

Rosseto Flávio R, Puhl Ana C, Andrade Maxuel O, Polikarpov Igor

机构信息

Instituto de Física de São Carlos, Universidade de São Paulo, Avenida Trabalhador Saocarlense 400, São Carlos-SP 13560-970, Brazil.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Feb 1;69(Pt 2):137-40. doi: 10.1107/S1744309112051408. Epub 2013 Jan 31.

Abstract

Cellulases, such as endoglucanases, exoglucanases and β-glucosidases, are important enzymes used in the process of enzymatic hydrolysis of plant biomass. The bacteria Xanthomonas campestris pv. campestris expresses a large number of hydrolases and the major endoglucanase (XccEG), a member of glycoside hydrolase family 5 (GH5), is the most strongly secreted extracellularly. In this work, the native XccEG was purified from the extracellular extract and crystallization assays were performed on its catalytic domain. A complete data set was collected on an in-house X-ray source. The crystal diffracted to 2.7 Å resolution and belonged to space group C2, with unit-cell parameters a = 174.66, b = 141.53, c = 108.00 Å, β = 110.49°. The Matthews coefficient suggests a solvent content of 70.1% and the presence of four protein subunits in the asymmetric unit.

摘要

纤维素酶,如内切葡聚糖酶、外切葡聚糖酶和β-葡萄糖苷酶,是植物生物质酶解过程中使用的重要酶。野油菜黄单胞菌野油菜致病变种表达大量水解酶,主要的内切葡聚糖酶(XccEG)是糖苷水解酶家族5(GH5)的成员,是细胞外分泌最强的酶。在这项工作中,从细胞外提取物中纯化了天然XccEG,并对其催化结构域进行了结晶试验。在内部X射线源上收集了完整的数据集。晶体衍射分辨率为2.7 Å,属于空间群C2,晶胞参数a = 174.66、b = 141.53、c = 108.00 Å,β = 110.49°。马修斯系数表明溶剂含量为70.1%,不对称单元中存在四个蛋白质亚基。

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