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与产前二氧化氮空气污染暴露相关的儿童甲基化全表观基因组荟萃分析。

Epigenome-Wide Meta-Analysis of Methylation in Children Related to Prenatal NO2 Air Pollution Exposure.

作者信息

Gruzieva Olena, Xu Cheng-Jian, Breton Carrie V, Annesi-Maesano Isabella, Antó Josep M, Auffray Charles, Ballereau Stéphane, Bellander Tom, Bousquet Jean, Bustamante Mariona, Charles Marie-Aline, de Kluizenaar Yvonne, den Dekker Herman T, Duijts Liesbeth, Felix Janine F, Gehring Ulrike, Guxens Mònica, Jaddoe Vincent V W, Jankipersadsing Soesma A, Merid Simon Kebede, Kere Juha, Kumar Ashish, Lemonnier Nathanael, Lepeule Johanna, Nystad Wenche, Page Christian Magnus, Panasevich Sviatlana, Postma Dirkje, Slama Rémy, Sunyer Jordi, Söderhäll Cilla, Yao Jin, London Stephanie J, Pershagen Göran, Koppelman Gerard H, Melén Erik

机构信息

Institute of Environmental Medicine, Karolinska Institutet, Stockholm, Sweden.

出版信息

Environ Health Perspect. 2017 Jan;125(1):104-110. doi: 10.1289/EHP36. Epub 2016 Jul 22.

Abstract

BACKGROUND

Prenatal exposure to air pollution is considered to be associated with adverse effects on child health. This may partly be mediated by mechanisms related to DNA methylation.

OBJECTIVES

We investigated associations between exposure to air pollution, using nitrogen dioxide (NO2) as marker, and epigenome-wide cord blood DNA methylation.

METHODS

We meta-analyzed the associations between NO2 exposure at residential addresses during pregnancy and cord blood DNA methylation (Illumina 450K) in four European and North American studies (n = 1,508) with subsequent look-up analyses in children ages 4 (n = 733) and 8 (n = 786) years. Additionally, we applied a literature-based candidate approach for antioxidant and anti-inflammatory genes. To assess influence of exposure at the transcriptomics level, we related mRNA expression in blood cells to NO2 exposure in 4- (n = 111) and 16-year-olds (n = 239).

RESULTS

We found epigenome-wide significant associations [false discovery rate (FDR) p < 0.05] between maternal NO2 exposure during pregnancy and DNA methylation in newborns for 3 CpG sites in mitochondria-related genes: cg12283362 (LONP1), cg24172570 (3.8 kbp upstream of HIBADH), and cg08973675 (SLC25A28). The associations with cg08973675 methylation were also significant in the older children. Further analysis of antioxidant and anti-inflammatory genes revealed differentially methylated CpGs in CAT and TPO in newborns (FDR p < 0.05). NO2 exposure at the time of biosampling in childhood had a significant impact on CAT and TPO expression.

CONCLUSIONS

NO2 exposure during pregnancy was associated with differential offspring DNA methylation in mitochondria-related genes. Exposure to NO2 was also linked to differential methylation as well as expression of genes involved in antioxidant defense pathways. Citation: Gruzieva O, Xu CJ, Breton CV, Annesi-Maesano I, Antó JM, Auffray C, Ballereau S, Bellander T, Bousquet J, Bustamante M, Charles MA, de Kluizenaar Y, den Dekker HT, Duijts L, Felix JF, Gehring U, Guxens M, Jaddoe VV, Jankipersadsing SA, Merid SK, Kere J, Kumar A, Lemonnier N, Lepeule J, Nystad W, Page CM, Panasevich S, Postma D, Slama R, Sunyer J, Söderhäll C, Yao J, London SJ, Pershagen G, Koppelman GH, Melén E. 2017. Epigenome-wide meta-analysis of methylation in children related to prenatal NO2 air pollution exposure. Environ Health Perspect 125:104-110; http://dx.doi.org/10.1289/EHP36.

摘要

背景

孕期暴露于空气污染被认为与儿童健康的不良影响有关。这可能部分是由与DNA甲基化相关的机制介导的。

目的

我们以二氧化氮(NO₂)作为标志物,研究了空气污染暴露与全基因组范围的脐带血DNA甲基化之间的关联。

方法

我们对四项欧洲和北美研究(n = 1508)中孕期居住地的NO₂暴露与脐带血DNA甲基化(Illumina 450K)之间的关联进行了荟萃分析,随后对4岁(n = 733)和8岁(n = 786)儿童进行了查找分析。此外,我们对抗氧化和抗炎基因应用了基于文献的候选方法。为了评估转录组学水平上暴露的影响,我们将4岁(n = 111)和16岁(n = 239)青少年血细胞中的mRNA表达与NO₂暴露相关联。

结果

我们发现孕期母亲的NO₂暴露与新生儿线粒体相关基因中的3个CpG位点的DNA甲基化之间存在全基因组范围的显著关联[错误发现率(FDR)p < 0.05]:cg12283362(LONP1)、cg24172570(HIBADH上游3.8 kbp)和cg08973675(SLC25A28)。与cg08973675甲基化的关联在年龄较大的儿童中也很显著。对抗氧化和抗炎基因的进一步分析显示,新生儿中CAT和TPO的CpG甲基化存在差异(FDR p < 0.05)。儿童期生物采样时的NO₂暴露对CAT和TPO表达有显著影响。

结论

孕期NO₂暴露与后代线粒体相关基因的DNA甲基化差异有关。NO₂暴露还与抗氧化防御途径中基因的甲基化差异以及表达有关。引文:Gruzieva O,Xu CJ,Breton CV,Annesi-Maesano I,Antó JM,Auffray C,Ballereau S,Bellander T,Bousquet J,Bustamante M,Charles MA,de Kluizenaar Y,den Dekker HT,Duijts L,Felix JF,Gehring U,Guxens M,Jaddoe VV,Jankipersadsing SA,Merid SK,Kere J,Kumar A,Lemonnier N,Lepeule J,Nystad W,Page CM,Panasevich S,Postma D,Slama R,Sunyer J,Söderhäll C,Yao J,London SJ,Pershagen G,Koppelman GH,Melén E. 2017. 与产前NO₂空气污染暴露相关的儿童甲基化全基因组荟萃分析。环境健康展望125:104 - 110;http://dx.doi.org/10.1289/EHP36

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