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儿童和成人乳糜泻之间共享的和独特的常见遗传决定因素。

Shared and unique common genetic determinants between pediatric and adult celiac disease.

作者信息

Senapati Sabyasachi, Sood Ajit, Midha Vandana, Sood Neena, Sharma Suresh, Kumar Lalit, Thelma B K

机构信息

Department of Genetics, University of Delhi South Campus, New Delhi, 110021, India.

Present Address: Centre for Human Genetics and Molecular Medicine, Central University of Punjab, Bathinda, Punjab, India.

出版信息

BMC Med Genomics. 2016 Jul 22;9(1):44. doi: 10.1186/s12920-016-0211-8.

Abstract

BACKGROUND

Based on age of presentation, celiac disease (CD) is categorised as pediatric CD and adult CD. It however remains unclear if these are genetically and/or phenotypically distinct disorders or just different spectrum of the same disease. We therefore explored the common genetic components underlying pediatric and adult CD in a well characterized north Indian cohort.

METHODS

A retrospective analysis of children (n = 531) and adult (n = 871) patients with CD between January 2001 and December 2010 was done. The database included basic demographic characteristics, clinical presentations, associated diseases and complications, if any. The genotype dataset was acquired for children (n = 217) and adult CD patients (n = 340) and controls (n = 736) using Immunochip. Association analysis was performed using logistic regression model to identify susceptibility genetic variants.

RESULTS

The predominant form of CD was classical CD in both pediatric and adult CD groups. There was remarkable similarity between pediatric and adult CD except for quantitative differences between the two groups such as female preponderance, non-classical presentation, co-occurrence of other autoimmune diseases being more common amongst adult CD. Notably, same HLA-DQ2 and -DQ8 haplotypes were established as the major risk factors in both types of CD. In addition, a few suggestively associated (p < 5 × 10(-4)) non-HLA markers were identified of which only ANK3 (rs4948256-A; rs10994257-T) was found to be shared and explain risk for ~45 % of CD patients with HLA allele.

DISCUSSION

Overall phenotypic similarity between pediatric and adult CD groups can be explained by contribution of same HLA risk alleles. Different non-HLA genes/loci with minor risk seem to play crucial role in disease onset and extra intestinal manifestation of CD. None of the non-HLA risk variants reached genome-wide significance, however most of them were shown to have functional implication to disease pathogenesis. Functional relevance of our findings needs to be investigated to address clinical heterogeneity of CD.

CONCLUSIONS

This present study is the first comparative study based on common genetic markers to suggest that CD in pediatric age group and in adults are the spectrum of the same disease with novel and shared genetic risk determinants. Follow-up fine mapping studies with larger study cohorts are warranted for further genetic investigation.

摘要

背景

根据发病年龄,乳糜泻(CD)分为儿童型CD和成人型CD。然而,尚不清楚这两种类型是基因和/或表型上不同的疾病,还是同一种疾病的不同表现形式。因此,我们在一个特征明确的印度北部队列中,探索了儿童型和成人型CD潜在的共同遗传成分。

方法

对2001年1月至2010年12月期间的531例儿童CD患者和871例成人CD患者进行回顾性分析。数据库包括基本人口统计学特征、临床表现、相关疾病及并发症(如有)。使用免疫芯片获取了217例儿童CD患者、340例成人CD患者及736例对照的基因型数据集。采用逻辑回归模型进行关联分析,以确定易感性遗传变异。

结果

儿童型和成人型CD组中,CD的主要形式均为经典型CD。儿童型和成人型CD之间存在显著相似性,只是两组之间存在一些数量上的差异,如女性占优势、非经典表现、其他自身免疫性疾病在成人CD中更常见。值得注意的是,相同的HLA-DQ2和-DQ8单倍型被确定为两种类型CD的主要危险因素。此外,还鉴定出一些提示性相关(p < 5×10⁻⁴)的非HLA标记,其中只有ANK3(rs4948256 - A;rs10994257 - T)被发现是共享的,可解释约45%携带HLA等位基因的CD患者的发病风险。

讨论

儿童型和成人型CD组之间总体表型相似性可由相同的HLA风险等位基因的作用来解释。不同的具有较小风险的非HLA基因/位点似乎在CD的发病和肠外表现中起关键作用。虽然没有一个非HLA风险变异达到全基因组显著性水平,但其中大多数已显示对疾病发病机制具有功能影响。需要对我们的研究结果进行功能相关性研究,以解决CD的临床异质性问题。

结论

本研究是第一项基于共同遗传标记的比较研究,表明儿童期和成人期的CD是同一种疾病的不同表现形式,具有新的和共享的遗传风险决定因素。有必要进行更大样本队列的后续精细定位研究,以进行进一步基因研究。

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