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总细胞RNA调节蛋白质活性。

Total Cellular RNA Modulates Protein Activity.

作者信息

Majumder Subhabrata, DeMott Christopher M, Reverdatto Sergey, Burz David S, Shekhtman Alexander

机构信息

Department of Chemistry, State University of New York at Albany , 1400 Washington Avenue, Albany, New York 12222, United States.

出版信息

Biochemistry. 2016 Aug 16;55(32):4568-73. doi: 10.1021/acs.biochem.6b00330. Epub 2016 Aug 3.

Abstract

RNA constitutes up to 20% of a cell's dry weight, corresponding to ∼20 mg/mL. This high concentration of RNA facilitates low-affinity protein-RNA quinary interactions, which may play an important role in facilitating and regulating biological processes. In the yeast Pichia pastoris, the level of ubiquitin-RNA colocalization increases when cells are grown in the presence of dextrose and methanol instead of methanol as the sole carbon source. Total RNA isolated from cells grown in methanol increases β-galactosidase activity relative to that seen with RNA isolated from cells grown in the presence of dextrose and methanol. Because the total cellular RNA content changes with growth medium, protein-RNA quinary interactions can alter in-cell protein biochemistry and may play an important role in cell adaptation, critical to many physiological and pathological states.

摘要

RNA占细胞干重的比例高达20%,相当于约20毫克/毫升。如此高浓度的RNA促进了低亲和力的蛋白质-RNA五元相互作用,这可能在促进和调节生物过程中发挥重要作用。在酵母毕赤酵母中,当细胞在葡萄糖和甲醇存在的情况下生长而不是以甲醇作为唯一碳源时,泛素-RNA共定位水平会增加。相对于从在葡萄糖和甲醇存在的情况下生长的细胞中分离的RNA,从在甲醇中生长的细胞中分离的总RNA会增加β-半乳糖苷酶活性。由于细胞总RNA含量随生长培养基而变化,蛋白质-RNA五元相互作用可改变细胞内蛋白质生物化学,并且可能在细胞适应中发挥重要作用,这对许多生理和病理状态至关重要。

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本文引用的文献

1
Grasping the nature of the cell interior: from Physiological Chemistry to Chemical Biology.
FEBS J. 2016 Aug;283(16):3016-28. doi: 10.1111/febs.13744. Epub 2016 May 11.
2
Structural disorder of monomeric α-synuclein persists in mammalian cells.
Nature. 2016 Feb 4;530(7588):45-50. doi: 10.1038/nature16531. Epub 2016 Jan 25.
4
Thermodynamics of protein destabilization in live cells.
Proc Natl Acad Sci U S A. 2015 Oct 6;112(40):12402-7. doi: 10.1073/pnas.1511308112. Epub 2015 Sep 21.
5
Probing protein quinary interactions by in-cell nuclear magnetic resonance spectroscopy.
Biochemistry. 2015 May 5;54(17):2727-38. doi: 10.1021/acs.biochem.5b00036. Epub 2015 Apr 27.
6
Quinary structure modulates protein stability in cells.
Proc Natl Acad Sci U S A. 2015 Feb 10;112(6):1739-42. doi: 10.1073/pnas.1417415112. Epub 2015 Jan 26.
7
Specific ion effects on macromolecular interactions in Escherichia coli extracts.
Protein Sci. 2015 Mar;24(3):310-8. doi: 10.1002/pro.2615. Epub 2014 Dec 30.
8
Segmentation and quantification of subcellular structures in fluorescence microscopy images using Squassh.
Nat Protoc. 2014 Mar;9(3):586-96. doi: 10.1038/nprot.2014.037. Epub 2014 Feb 13.
9
Molecular crowding drives active Pin1 into nonspecific complexes with endogenous proteins prior to substrate recognition.
J Am Chem Soc. 2013 Sep 18;135(37):13796-803. doi: 10.1021/ja405244v. Epub 2013 Sep 6.
10
Quinary protein structure and the consequences of crowding in living cells: leaving the test-tube behind.
Bioessays. 2013 Nov;35(11):984-93. doi: 10.1002/bies.201300080. Epub 2013 Aug 14.

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