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ProDeGe: a computational protocol for fully automated decontamination of genomes.ProDeGe：一种用于基因组全自动净化的计算协议。
ISME J. 2016 Jan;10(1):269-72. doi: 10.1038/ismej.2015.100. Epub 2015 Jun 9.
2
Cloning and expression of three ladA-type alkane monooxygenase genes from an extremely thermophilic alkane-degrading bacterium Geobacillus thermoleovorans B23.从极度嗜热烷烃降解菌 Geobacillus thermoleovorans B23 中克隆和表达三种 ladA 型烷烃单加氧酶基因。
Extremophiles. 2014 May;18(3):515-23. doi: 10.1007/s00792-014-0636-y. Epub 2014 Mar 30.
3
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
4
[Detection and transcription of n-alkane biodegradation genes (alkB) in the genome of a hydrocarbon-oxidizing bacterium Geobacillus subterraneus K].[烃氧化细菌嗜热栖热放线菌K基因组中正烷烃生物降解基因（alkB）的检测与转录]
Mikrobiologiia. 2011 Sep-Oct;80(5):669-78.
5
Two novel metal-independent long-chain alkyl alcohol dehydrogenases from Geobacillus thermodenitrificans NG80-2.来自嗜热脱氮地芽孢杆菌NG80-2的两种新型非依赖金属的长链烷基醇脱氢酶。
Microbiology (Reading). 2009 Jun;155(Pt 6):2078-2085. doi: 10.1099/mic.0.027201-0. Epub 2009 Apr 21.
6
[AlkB homologues in thermophilic bacteria of the genus Geobacillus].嗜热栖热放线菌属嗜热细菌中的 AlkB 同源物
Mol Biol (Mosk). 2008 Mar-Apr;42(2):247-57.
7
Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. th.嗜热需氧芽孢杆菌的分类学研究：地下嗜热栖热菌新属、新种及乌津嗜热栖热菌新种的描述，从石油储层分离，以及嗜热脂肪芽孢杆菌、热链芽孢杆菌、嗜热油芽孢杆菌、嗜碱芽孢杆菌、热脱硝芽孢杆菌转移至嗜热栖热菌属成为新组合嗜热脂肪栖热菌、嗜热链栖热菌等。
Int J Syst Evol Microbiol. 2001 Mar;51(Pt 2):433-46. doi: 10.1099/00207713-51-2-433.

从哈萨克斯坦一个石油储层分离出的嗜热烃氧化细菌——地下芽孢杆菌菌株K的基因组序列草图

Draft Genome Sequence of Geobacillus subterraneus Strain K, a Hydrocarbon-Oxidizing Thermophilic Bacterium Isolated from a Petroleum Reservoir in Kazakhstan.

作者信息

Poltaraus Andrey B, Sokolova Diyana S, Grouzdev Denis S, Ivanov Timophey M, Malakho Sophia G, Korshunova Alena V, Tourova Tatiyana P, Nazina Tamara N

机构信息

Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russian Federation.

Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russian Federation.

出版信息

Genome Announc. 2016 Aug 4;4(4):e00782-16. doi: 10.1128/genomeA.00782-16.

DOI:10.1128/genomeA.00782-16
PMID:27491973
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4974325/
Abstract

The draft genome sequence of Geobacillus subterraneus strain K, a thermophilic aerobic oil-oxidizing bacterium isolated from production water of the Uzen high-temperature oil field in Kazakhstan, is presented here. The genome is annotated for elucidation of the genomic and phenotypic diversity of thermophilic alkane-oxidizing bacteria.

摘要

本文展示了从哈萨克斯坦乌津高温油田采出水中分离得到的嗜热需氧石油氧化细菌——地下芽孢杆菌K菌株的基因组序列草图。对该基因组进行注释，以阐明嗜热烷烃氧化细菌的基因组和表型多样性。