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从中国一个稠油油藏中分离出的烃氧化嗜热细菌sp. 1017的基因组测序与注释

Genome sequencing and annotation of sp. 1017, a hydrocarbon-oxidizing thermophilic bacterium isolated from a heavy oil reservoir (China).

作者信息

Kadnikov Vitaly V, Mardanov Andrey V, Poltaraus Andrey B, Sokolova Diyana S, Semenova Ekaterina M, Ravin Nikolay V, Tourova Tatiyana P, Nazina Tamara N

机构信息

Institute of Bioengineering, Research Center of Biotechnology, Russian Academy of Sciences, Prospect 60-letiya Oktyabrya, 7/1, Moscow 117312, Russian Federation.

Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, ul. Vavilova, 32, Moscow 119991, Russian Federation.

出版信息

Genom Data. 2016 Dec 29;11:95-97. doi: 10.1016/j.gdata.2016.12.011. eCollection 2017 Mar.

DOI:10.1016/j.gdata.2016.12.011
PMID:28070486
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5219642/
Abstract

The draft genome sequence of sp. strain 1017, a thermophilic aerobic oil-oxidizing bacterium isolated from formation water of the Dagang high-temperature oilfield, China, is presented here. The genome comprised 3.6 Mbp, with the G + C content of 51.74%. The strain had a number of genes responsible for numerous metabolic and transport systems, exopolysaccharide biosynthesis, and decomposition of sugars and aromatic compounds, as well as the genes related to resistance to metals and metalloids. The genome sequence is available at DDBJ/EMBL/GenBank under the accession no MQMG00000000. This genome is annotated for elucidation of the genomic and phenotypic diversity of new thermophilic alkane-oxidizing bacteria of the genus .

摘要

本文公布了从中国大港高温油田地层水中分离出的嗜热需氧石油氧化菌sp.菌株1017的基因组序列草图。该基因组由360万个碱基对组成，G + C含量为51.74%。该菌株拥有许多负责多种代谢和转运系统、胞外多糖生物合成、糖类和芳香化合物分解的基因，以及与金属和类金属抗性相关的基因。该基因组序列可在DDBJ/EMBL/GenBank上获取，登录号为MQMG00000000。该基因组已注释，用于阐明该属新的嗜热烷烃氧化细菌的基因组和表型多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ab5/5219642/9473284d37d3/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ab5/5219642/9473284d37d3/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ab5/5219642/9473284d37d3/gr1.jpg

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