Graff van Creveld Shiri, Rosenwasser Shilo, Levin Yishai, Vardi Assaf
Department of Plant and Environmental Sciences (S.G.v.C., S.R., A.V.),and Israel National Center for Personalized Medicine (Y.L.), Weizmann Institute of Science, Rehovot 7610001, Israel.
Plant Physiol. 2016 Oct;172(2):968-979. doi: 10.1104/pp.16.00840. Epub 2016 Aug 8.
Diatoms are single-celled, photosynthetic, bloom-forming algae that are responsible for at least 20% of global primary production. Nevertheless, more than 30% of the oceans are considered "ocean deserts" due to iron limitation. We used the diatom Phaeodactylum tricornutum as a model system to explore diatom's response to iron limitation and its interplay with susceptibility to oxidative stress. By analyzing physiological parameters and proteome profiling, we defined two distinct phases: short-term (<3 d, phase I) and chronic (>5 d, phase II) iron limitation. While at phase I no significant changes in physiological parameters were observed, molecular markers for iron starvation, such as Iron Starvation Induced Protein and flavodoxin, were highly up-regulated. At phase II, down-regulation of numerous iron-containing proteins was detected in parallel to reduction in growth rate, chlorophyll content, photosynthetic activity, respiration rate, and antioxidant capacity. Intriguingly, while application of oxidative stress to phase I and II iron-limited cells similarly oxidized the reduced glutathione (GSH) pool, phase II iron limitation exhibited transient resistance to oxidative stress, despite the down regulation of many antioxidant proteins. By comparing proteomic profiles of P. tricornutum under iron limitation and metatranscriptomic data of an iron enrichment experiment conducted in the Pacific Ocean, we propose that iron-limited cells in the natural environment resemble the phase II metabolic state. These results provide insights into the trade-off between optimal growth rate and susceptibility to oxidative stress in the response of diatoms to iron quota in the marine environment.
硅藻是单细胞、光合、能形成水华的藻类,其贡献了全球至少20%的初级生产力。然而,由于铁限制,超过30%的海洋被认为是“海洋沙漠”。我们以三角褐指藻作为模型系统,来探究硅藻对铁限制的反应及其与氧化应激敏感性的相互作用。通过分析生理参数和蛋白质组图谱,我们定义了两个不同阶段:短期(<3天,第一阶段)和长期(>5天,第二阶段)铁限制。在第一阶段,生理参数未观察到显著变化,但铁饥饿的分子标记物,如铁饥饿诱导蛋白和黄素氧还蛋白,被高度上调。在第二阶段,检测到许多含铁蛋白的下调,同时生长速率、叶绿素含量、光合活性、呼吸速率和抗氧化能力也降低。有趣的是,虽然对第一阶段和第二阶段铁限制细胞施加氧化应激同样会氧化还原型谷胱甘肽(GSH)库,但尽管许多抗氧化蛋白下调,第二阶段铁限制对氧化应激表现出短暂抗性。通过比较铁限制条件下三角褐指藻的蛋白质组图谱和在太平洋进行的铁富集实验的宏转录组数据,我们提出自然环境中的铁限制细胞类似于第二阶段的代谢状态。这些结果为硅藻在海洋环境中对铁配额的反应中最佳生长速率与氧化应激敏感性之间的权衡提供了见解。