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逆转录转座子衍生的p53结合位点增强端粒维持和基因组保护。

Retrotransposon-derived p53 binding sites enhance telomere maintenance and genome protection.

作者信息

Lieberman Paul M

机构信息

The Wistar Institute, Philadelphia, PA, USA.

出版信息

Bioessays. 2016 Oct;38(10):943-9. doi: 10.1002/bies.201600078. Epub 2016 Aug 19.

DOI:10.1002/bies.201600078
PMID:27539745
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5157200/
Abstract

Tumor suppressor protein 53 (p53) plays a central role in the control of genome stability, acting primarily through the transcriptional activation of stress-response genes. However, many p53 binding sites are located at genomic locations with no obvious regulatory-link to known stress-response genes. We recently discovered p53 binding sites within retrotransposon-derived elements in human and mouse subtelomeres. These retrotransposon-derived p53 binding sites protected chromosome ends through transcription activation of telomere repeat RNA, as well as through the direct modification of local chromatin structure in response to DNA damage. Based on these findings, I hypothesize that a class of p53 binding sites, including the retrotransposon-derived p53-sites found in subtlomeres, provide a primary function in genome stability by mounting a direct and local protective chromatin-response to DNA damage. I speculate that retrotransposon-derived p53 binding sites share features with telomere-repeats through an evolutionary drive to monitor and maintain genome integrity.

摘要

肿瘤抑制蛋白53(p53)在基因组稳定性控制中起核心作用,主要通过应激反应基因的转录激活发挥作用。然而,许多p53结合位点位于基因组位置,与已知的应激反应基因没有明显的调控联系。我们最近在人和小鼠亚端粒的逆转录转座子衍生元件中发现了p53结合位点。这些逆转录转座子衍生的p53结合位点通过端粒重复RNA的转录激活以及响应DNA损伤对局部染色质结构的直接修饰来保护染色体末端。基于这些发现,我推测一类p53结合位点,包括在亚端粒中发现的逆转录转座子衍生的p53位点,通过对DNA损伤产生直接和局部的保护性染色质反应,在基因组稳定性中发挥主要作用。我推测逆转录转座子衍生的p53结合位点通过监测和维持基因组完整性的进化驱动力与端粒重复序列具有共同特征。

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p53 downregulates the Fanconi anaemia DNA repair pathway.p53下调范可尼贫血DNA修复途径。
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p53 transcriptional programs in B cells upon exposure to genotoxic stress in vivo: Computational analysis of next-generation sequencing data.体内B细胞在受到基因毒性应激时的p53转录程序:下一代测序数据的计算分析
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Enhancers as non-coding RNA transcription units: recent insights and future perspectives.
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Exome Sequencing of Uterine Leiomyosarcomas Identifies Frequent Mutations in TP53, ATRX, and MED12.子宫平滑肌肉瘤的外显子测序鉴定出TP53、ATRX和MED12的常见突变。
PLoS Genet. 2016 Feb 18;12(2):e1005850. doi: 10.1371/journal.pgen.1005850. eCollection 2016 Feb.
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p53 genes function to restrain mobile elements.p53基因的功能是抑制移动元件。
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DNA repair and aging: the impact of the p53 family.DNA修复与衰老:p53家族的影响
Aging (Albany NY). 2015 Dec;7(12):1050-65. doi: 10.18632/aging.100858.
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Subtelomeric p53 binding prevents accumulation of DNA damage at human telomeres.亚端粒p53结合可防止人类端粒处DNA损伤的积累。
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