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雪栖膜菌新种,从南极洲红雪中分离得到。

Hymenobacter nivis sp. nov., isolated from red snow in Antarctica.

作者信息

Kojima Hisaya, Watanabe Miho, Tokizawa Riho, Shinohara Arisa, Fukui Manabu

机构信息

The Institute of Low Temperature Science, Hokkaido University, Kita-19, Nishi-8, Kita-ku, Sapporo 060-0819, Japan.

Postdoctoral Research Fellow of the Japan Society for the Promotion of Science, Chiyoda-ku, Tokyo 102-8471, Japan.

出版信息

Int J Syst Evol Microbiol. 2016 Nov;66(11):4821-4825. doi: 10.1099/ijsem.0.001435. Epub 2016 Aug 19.

Abstract

A novel aerobic bacterial strain, P3T, was isolated from a red snow obtained from Antarctica. Cells of strain P3T were rod-shaped, non-motile, catalase-negative, oxidase-positive and Gram-stain-negative. Growth was observed at temperatures ranging from 0 to 25 °C, with optimum growth at 15 °C. The pH range for growth was pH 5.3-7.8. The G+C content of the genomic DNA was 55.0 mol%. The major components in the fatty acid profile were iso-C15 : 0, summed feature 4 (iso-C17 : 1 I and/or anteiso-C17 : 1 B), anteiso-C15 : 0 and summed feature 3 (iso-C16 : 1ω7c and/or iso-C16 : 1ω6c). The predominant isoprenoid quinone was MK-7. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that the novel isolate was a member of the genus Hymenobacter, and the strain showed highest sequence similarity (94 %) with H.ymenpbacter glaciei VUG-A130T, Hymenobacter. soli PB17T and Hymenobacter. antarcticus VUG-A42aaT. On the basis of phylogenetic and phenotypic properties strain P3T represents a novel species of the genus Hymenobacter (for which the name Hymenobacter nivis sp. nov. is proposed. The types strain is P3T (=DSM 101755T=NBRC 111535T).

摘要

从南极洲采集的红雪中分离出一种新型需氧细菌菌株P3T。菌株P3T的细胞呈杆状,无运动性,过氧化氢酶阴性,氧化酶阳性,革兰氏染色阴性。在0至25°C的温度范围内观察到生长,最适生长温度为15°C。生长的pH范围是pH 5.3 - 7.8。基因组DNA的G+C含量为55.0 mol%。脂肪酸谱中的主要成分是异C15:0、总和特征4(异C17:1 I和/或anteiso-C17:1 B)、anteiso-C15:0和总和特征3(异C16:1ω7c和/或异C16:1ω6c)。主要的类异戊二烯醌是MK-7。基于16S rRNA基因序列的系统发育分析表明,该新分离株是膜杆菌属的成员,该菌株与冰川膜杆菌VUG-A130T、土壤膜杆菌PB17T和南极膜杆菌VUG-A42aaT的序列相似性最高(94%)。基于系统发育和表型特征,菌株P3T代表膜杆菌属的一个新物种(为此提出名称雪膜杆菌新种。模式菌株是P3T(=DSM 101755T=NBRC 111535T)。

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