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新种克努恩斯海默菌,从河水中分离得到。

Hymenobacter knuensis sp. nov., Isolated From River Water.

作者信息

Ten Leonid N, Lee Jae-Jin, Lee Yeon-Hee, Park Su-Jin, Lee Seung-Yeol, Park Sangkyu, Lee Dae Sung, Kang In-Kyu, Kim Myung Kyum, Jung Hee-Young

机构信息

School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.

Department of Environmental Engineering, Kyungpook National University, Daegu, 41566, Republic of Korea.

出版信息

Curr Microbiol. 2017 Apr;74(4):515-521. doi: 10.1007/s00284-017-1216-z. Epub 2017 Feb 27.

Abstract

A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterial strain, designated 16F7C-2, was isolated from the Han River, South Korea, and was characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain 16F7C-2 belonged to the family Cytophagaceae in the phylum Bacteroidetes and was most closely related to Hymenobacter algoricola VUG-A23a (98.3%) and Hymenobacter fastidiosus VUG-A124 (97.7%). The G + C content of the genomic DNA of strain 16F7C-2 was 63.4 mol%. The detection of menaquinone MK-7 as the predominant respiratory quinone; a fatty acid profile with summed feature 3 (C ω7c/C ω6c; 19.5%), summed feature 4 (C iso I/C anteiso B; 15.9%), C iso (12.6%), C ω5c (10.5%), and C anteiso (10.4%) as the major components; and a polar lipid profile with phosphatidylethanolamine as the major component also supported the affiliation of strain 16F7C-2 to the genus Hymenobacter. The DNA-DNA relatedness between strain 16F7C-2 and H. algoricola JCM 17214 and H. fastidiosus JCM17224 were 45.2 ± 5.8 and 40.3 ± 2.9%, respectively, clearly showing that the isolate constitutes a new genospecies. Strain 16F7C-2 could be clearly differentiated from its closest neighbors on the basis of its phenotypic, genotypic, and chemotaxonomic features. Therefore, strain 16F7C-2 represents a novel species of the genus Hymenobacter, for which the name Hymenobacter knuensis sp. nov. is proposed. The type strain is 16F7C-2 (=KCTC 52538 = JCM 31814).

摘要

从韩国汉江分离出一株革兰氏阴性、无运动性、不形成芽孢、杆状、需氧的细菌菌株,命名为16F7C - 2,并采用多相分类法对其进行分类学特征分析。16S rRNA基因序列比较分析表明,菌株16F7C - 2属于拟杆菌门噬细胞菌科,与嗜冷膜杆菌VUG - A23a(98.3%)和苛求膜杆菌VUG - A124(97.7%)亲缘关系最近。菌株16F7C - 2基因组DNA的G + C含量为63.4 mol%。检测到主要呼吸醌为甲基萘醌MK - 7;脂肪酸谱以特征性总和3(C ω7c/C ω6c;19.5%)、特征性总和4(C异戊酸I/C反异戊酸B;15.9%)、C异戊酸(12.6%)、C ω5c(10.5%)和C反异戊酸(10.4%)为主要成分;极性脂质谱以磷脂酰乙醇胺为主要成分,这些也支持菌株16F7C - 2属于膜杆菌属。菌株16F7C - 2与嗜冷膜杆菌JCM 17214和苛求膜杆菌JCM17224之间的DNA - DNA相关性分别为45.2 ± 5.8%和40.3 ± 2.9%,清楚地表明该分离株构成一个新的基因种。菌株16F7C - 2可根据其表型、基因型和化学分类特征与最接近亲缘种明显区分开来。因此,菌株16F7C - 2代表膜杆菌属的一个新物种,提议将其命名为庆熙膜杆菌(Hymenobacter knuensis sp. nov.)。模式菌株为16F7C - 2(=KCTC 52538 = JCM 31814)。

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