Suppr超能文献

用于动态核极化的钆(III)和锰(II)配合物:小分子螯合极化剂及其在蛋白质定点自旋标记中的应用

Gd(iii) and Mn(ii) complexes for dynamic nuclear polarization: small molecular chelate polarizing agents and applications with site-directed spin labeling of proteins.

作者信息

Kaushik Monu, Bahrenberg Thorsten, Can Thach V, Caporini Marc A, Silvers Robert, Heiliger Jörg, Smith Albert A, Schwalbe Harald, Griffin Robert G, Corzilius Björn

机构信息

Institute of Physical and Theoretical Chemistry and Institute of Biophysical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 7-9, 60438 Frankfurt am Main, Germany.

出版信息

Phys Chem Chem Phys. 2016 Oct 21;18(39):27205-27218. doi: 10.1039/c6cp04623a. Epub 2016 Aug 22.

Abstract

We investigate complexes of two paramagnetic metal ions Gd and Mn to serve as polarizing agents for solid-state dynamic nuclear polarization (DNP) of H, C, and N at magnetic fields of 5, 9.4, and 14.1 T. Both ions are half-integer high-spin systems with a zero-field splitting and therefore exhibit a broadening of the m = -1/2 ↔ +1/2 central transition which scales inversely with the external field strength. We investigate experimentally the influence of the chelator molecule, strong hyperfine coupling to the metal nucleus, and deuteration of the bulk matrix on DNP properties. At small Gd-DOTA concentrations the narrow central transition allows us to polarize nuclei with small gyromagnetic ratio such as C and even N via the solid effect. We demonstrate that enhancements observed are limited by the available microwave power and that large enhancement factors of >100 (for H) and on the order of 1000 (for C) can be achieved in the saturation limit even at 80 K. At larger Gd(iii) concentrations (≥10 mM) where dipolar couplings between two neighboring Gd complexes become substantial a transition towards cross effect as dominating DNP mechanism is observed. Furthermore, the slow spin-diffusion between C and N, respectively, allows for temporally resolved observation of enhanced polarization spreading from nuclei close to the paramagnetic ion towards nuclei further removed. Subsequently, we present preliminary DNP experiments on ubiquitin by site-directed spin-labeling with Gd chelator tags. The results hold promise towards applications of such paramagnetically labeled proteins for DNP applications in biophysical chemistry and/or structural biology.

摘要

我们研究了两种顺磁性金属离子钆(Gd)和锰(Mn)的配合物,以作为在5、9.4和14.1特斯拉磁场下对氢(H)、碳(C)和氮(N)进行固态动态核极化(DNP)的极化剂。这两种离子都是具有零场分裂的半整数高自旋体系,因此在m = -1/2 ↔ +1/2中心跃迁处会出现展宽,展宽与外场强度成反比。我们通过实验研究了螯合剂分子、与金属核的强超精细耦合以及主体基质的氘代对DNP性质的影响。在低钆 - 二乙三胺五乙酸(Gd - DOTA)浓度下,狭窄的中心跃迁使我们能够通过固体效应使诸如碳甚至氮等具有小旋磁比的核极化。我们证明观察到的增强受可用微波功率限制,并且即使在80 K的饱和极限下,也可以实现大于100(对于氢)和大约1000(对于碳)的大增强因子。在较高的钆(Ⅲ)浓度(≥10 mM)下,两个相邻钆配合物之间的偶极耦合变得显著,观察到向交叉效应作为主导DNP机制的转变。此外,碳和氮之间缓慢的自旋扩散分别允许对极化从靠近顺磁性离子的核向更远的核的增强扩散进行时间分辨观察。随后,我们通过用钆螯合剂标签进行定点自旋标记展示了对泛素的初步DNP实验。这些结果有望将这种顺磁性标记的蛋白质应用于生物物理化学和/或结构生物学中的DNP应用。

相似文献

2
High-field dynamic nuclear polarization with high-spin transition metal ions.
J Am Chem Soc. 2011 Apr 20;133(15):5648-51. doi: 10.1021/ja1109002. Epub 2011 Mar 29.
3
Generic tags for Mn(ii) and Gd(iii) spin labels for distance measurements in proteins.
Phys Chem Chem Phys. 2017 Oct 11;19(39):26944-26956. doi: 10.1039/c7cp04311b.
4
Theory of solid effect and cross effect dynamic nuclear polarization with half-integer high-spin metal polarizing agents in rotating solids.
Phys Chem Chem Phys. 2016 Oct 21;18(39):27190-27204. doi: 10.1039/c6cp04621e. Epub 2016 Aug 22.
5
Bis-Gadolinium Complexes for Solid Effect and Cross Effect Dynamic Nuclear Polarization.
Angew Chem Int Ed Engl. 2017 Apr 3;56(15):4295-4299. doi: 10.1002/anie.201612388. Epub 2017 Mar 20.
6
Site-specific dynamic nuclear polarization in a Gd(III)-labeled protein.
Phys Chem Chem Phys. 2020 Nov 18;22(44):25455-25466. doi: 10.1039/d0cp05021k.
8
High-Field Dynamic Nuclear Polarization for Solid and Solution Biological NMR.
Appl Magn Reson. 2008 Aug;34(3-4):237-263. doi: 10.1007/s00723-008-0129-1.
9
C Dynamic Nuclear Polarization Using a Trimeric Gd Complex as an Additive.
J Phys Chem A. 2017 Jul 13;121(27):5127-5135. doi: 10.1021/acs.jpca.7b03869. Epub 2017 Jun 28.
10
Design Principles for the Development of Gd(III) Polarizing Agents for Magic Angle Spinning Dynamic Nuclear Polarization.
J Phys Chem C Nanomater Interfaces. 2022 Jul 14;126(27):11310-11317. doi: 10.1021/acs.jpcc.2c01721. Epub 2022 Jul 5.

引用本文的文献

1
Dynamic Nuclear Polarization of Inorganic Halide Perovskites.
J Phys Chem C Nanomater Interfaces. 2023 Jun 2;127(23):11094-11102. doi: 10.1021/acs.jpcc.3c01527. eCollection 2023 Jun 15.
3
The Effect of Disorder on Endogenous MAS-DNP: Study of Silicate Glasses and Crystals.
J Phys Chem C Nanomater Interfaces. 2023 Feb 27;127(9):4759-4772. doi: 10.1021/acs.jpcc.2c08849. eCollection 2023 Mar 9.
4
Spin Hyperpolarization in Modern Magnetic Resonance.
Chem Rev. 2023 Feb 22;123(4):1417-1551. doi: 10.1021/acs.chemrev.2c00534. Epub 2023 Jan 26.
5
A Comparative Study of Nitroxide-Based Biradicals for Dynamic Nuclear Polarization in Cellular Environments.
Chembiochem. 2022 Dec 16;23(24):e202200577. doi: 10.1002/cbic.202200577. Epub 2022 Nov 14.
6
Off-the-Shelf Gd(NO) as an Efficient High-Spin Metal Ion Polarizing Agent for Magic Angle Spinning Dynamic Nuclear Polarization.
J Phys Chem B. 2022 Aug 25;126(33):6281-6289. doi: 10.1021/acs.jpcb.2c04184. Epub 2022 Aug 16.
7
Design Principles for the Development of Gd(III) Polarizing Agents for Magic Angle Spinning Dynamic Nuclear Polarization.
J Phys Chem C Nanomater Interfaces. 2022 Jul 14;126(27):11310-11317. doi: 10.1021/acs.jpcc.2c01721. Epub 2022 Jul 5.
8
A Chemical Biology Primer for NMR Spectroscopists.
J Magn Reson Open. 2022 Jun;10-11. doi: 10.1016/j.jmro.2022.100044. Epub 2022 Feb 18.
9
Numerical recipes for faster MAS-DNP simulations.
J Magn Reson. 2021 Dec;333:107106. doi: 10.1016/j.jmr.2021.107106. Epub 2021 Nov 9.
10
Targeted DNP for biomolecular solid-state NMR.
Chem Sci. 2021 Mar 23;12(18):6223-6237. doi: 10.1039/d0sc06959k.

本文引用的文献

1
Biomolecular DNP-Supported NMR Spectroscopy using Site-Directed Spin Labeling.
Chemistry. 2015 Sep 7;21(37):12971-7. doi: 10.1002/chem.201501376.
2
Multiple Pathway Relaxation Enhancement in the System Composed of Three Paramagnetic Species: Nitroxide Radical-Ln(3+)-O2.
J Phys Chem Lett. 2012 May 17;3(10):1336-40. doi: 10.1021/jz300316q. Epub 2012 May 4.
3
Cysteine-Specific Labeling of Proteins with a Nitroxide Biradical for Dynamic Nuclear Polarization NMR.
J Phys Chem B. 2015 Aug 13;119(32):10180-90. doi: 10.1021/acs.jpcb.5b05230. Epub 2015 Jul 31.
4
Dynamic nuclear polarization of nucleic acid with endogenously bound manganese.
J Biomol NMR. 2015 Sep;63(1):97-109. doi: 10.1007/s10858-015-9972-1. Epub 2015 Jul 29.
5
Enlightening the photoactive site of channelrhodopsin-2 by DNP-enhanced solid-state NMR spectroscopy.
Proc Natl Acad Sci U S A. 2015 Aug 11;112(32):9896-901. doi: 10.1073/pnas.1507713112. Epub 2015 Jul 27.
8
Simultaneous DNP enhancements of (1)H and (13)C nuclei: theory and experiments.
Phys Chem Chem Phys. 2015 May 7;17(17):11868-83. doi: 10.1039/c5cp00406c.
9
Magic angle spinning NMR of proteins: high-frequency dynamic nuclear polarization and (1)H detection.
Annu Rev Biochem. 2015;84:465-97. doi: 10.1146/annurev-biochem-060614-034206. Epub 2015 Mar 30.
10
Dynamic nuclear polarization of membrane proteins: covalently bound spin-labels at protein-protein interfaces.
J Biomol NMR. 2015 Apr;61(3-4):361-7. doi: 10.1007/s10858-015-9919-6. Epub 2015 Apr 1.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验