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生物催化不对称烯烃还原:来自……的双键还原酶的晶体结构与表征

Biocatalytic Asymmetric Alkene Reduction: Crystal Structure and Characterization of a Double Bond Reductase from .

作者信息

Mansell David J, Toogood Helen S, Waller John, Hughes John M X, Levy Colin W, Gardiner John M, Scrutton Nigel S

机构信息

Manchester Institute of Biotechnology, School of Chemistry, and Faculty of Life Sciences, University of Manchester , Manchester, U.K.

出版信息

ACS Catal. 2013 Mar 1;3(3):370-379. doi: 10.1021/cs300709m. Epub 2013 Jan 21.

Abstract

The application of biocatalysis for the asymmetric reduction of activated C=C is a powerful tool for the manufacture of high-value chemical commodities. The biocatalytic potential of "-ene" reductases from the Old Yellow Enzyme (OYE) family of oxidoreductases is well-known; however, the specificity of these enzymes toward mainly small molecule substrates has highlighted the need to discover "-ene" reductases from different enzymatic classes to broaden industrial applicability. Here, we describe the characterization of a flavin-free double bond reductase from (NtDBR), which belongs to the leukotriene B dehydrogenase (LTD) subfamily of the zinc-independent, medium chain dehydrogenase/reductase superfamily of enzymes. Using steady-state kinetics and biotransformation reactions, we have demonstrated the regio- and stereospecificity of NtDBR against a variety of α,β-unsaturated activated alkenes. In addition to catalyzing the reduction of typical LTD substrates and several classical OYE-like substrates, NtDBR also exhibited complementary activity by reducing non-OYE substrates (i.e., reducing the exocyclic C=C double bond of ()-pulegone) and in some cases showing an opposite stereopreference in comparison with the OYE family member pentaerythritol tetranitrate (PETN) reductase. This serves to augment classical OYE "-ene" reductase activity and, coupled with its aerobic stability, emphasizes the potential industrial value of NtDBR. Furthermore, we also report the X-ray crystal structures of the holo-, binary NADP(H)-bound, and ternary [NADP and 4-hydroxy-3-methoxycinnamaldehyde ()-bound] NtDBR complexes. These will underpin structure-driven site-saturated mutagenesis studies aimed at enhancing the reactivity, stereochemistry, and specificity of this enzyme.

摘要

生物催化用于活化碳 - 碳双键的不对称还原是制造高价值化学商品的有力工具。氧化还原酶的老黄色酶(OYE)家族中“-ene”还原酶的生物催化潜力是众所周知的;然而,这些酶对主要小分子底物的特异性突出了从不同酶类中发现“-ene”还原酶以拓宽工业适用性的必要性。在此,我们描述了来自烟草(NtDBR)的一种无黄素双键还原酶的特性,它属于锌非依赖性中链脱氢酶/还原酶超家族的白三烯B脱氢酶(LTD)亚家族。通过稳态动力学和生物转化反应,我们证明了NtDBR对多种α,β - 不饱和活化烯烃的区域和立体特异性。除了催化典型的LTD底物和几种经典的OYE样底物的还原反应外,NtDBR还通过还原非OYE底物(即还原()-胡薄荷酮的环外碳 - 碳双键)表现出互补活性,并且在某些情况下与OYE家族成员季戊四醇四硝酸酯(PETN)还原酶相比显示出相反的立体偏好。这有助于增强经典的OYE“-ene”还原酶活性,并且与其需氧稳定性相结合,强调了NtDBR的潜在工业价值。此外,我们还报道了全酶、二元NADP(H)结合和三元[NADP与4 - 羟基 - 3 - 甲氧基肉桂醛()结合] NtDBR复合物的X射线晶体结构。这些将为旨在提高该酶的反应性、立体化学和特异性的结构驱动的位点饱和诱变研究奠定基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1321/4990313/013873673170/cs-2012-00709m_0003.jpg

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