Cosnefroy Ophélie, Murray Philip J, Bishop Kate N
Retroviral Replication Laboratory, The Francis Crick Institute, Mill Hill Laboratory, The Ridgeway, Mill Hill, London, NW7 1AA, UK.
Division of Mathematics, University of Dundee, Dundee, DD1 4HN, UK.
Retrovirology. 2016 Aug 22;13(1):58. doi: 10.1186/s12977-016-0292-7.
Correct disassembly of the HIV-1 capsid shell, called uncoating, is increasingly recognised as central for multiple steps during retroviral replication. However, the timing, localisation and mechanism of uncoating are poorly understood and progress in this area is hampered by difficulties in measuring the process. Previous work suggested that uncoating occurs soon after entry of the viral core into the cell, but recent studies report later uncoating, at or in the nucleus. Furthermore, inhibiting reverse transcription delays uncoating, linking these processes.
Here, we have used a combined approach of experimental interrogation of viral mutants and mathematical modelling to investigate the timing of uncoating with respect to reverse transcription. By developing a minimal, testable, model and employing multiple uncoating assays to overcome the disadvantages of each single assay, we find that uncoating is not concomitant with the initiation of reverse transcription. Instead, uncoating appears to be triggered once reverse transcription reaches a certain stage, namely shortly after first strand transfer.
Using multiple approaches, we have identified a point during reverse transcription that induces uncoating of the HIV-1 CA shell. We propose that uncoating initiates after the first strand transfer of reverse transcription.
HIV-1衣壳壳层的正确拆解,即脱壳,越来越被认为是逆转录病毒复制过程中多个步骤的核心。然而,脱壳的时间、定位和机制尚不清楚,并且该领域的进展因测量这一过程的困难而受阻。先前的研究表明,脱壳在病毒核心进入细胞后不久就会发生,但最近的研究报告称脱壳发生得较晚,在细胞核内或进入细胞核时。此外,抑制逆转录会延迟脱壳,将这些过程联系起来。
在这里,我们采用了对病毒突变体进行实验探究和数学建模相结合的方法,来研究脱壳相对于逆转录的时间。通过建立一个简单的、可测试的模型,并采用多种脱壳检测方法来克服每种单一检测方法的缺点,我们发现脱壳与逆转录的起始并不同时发生。相反,脱壳似乎是在逆转录达到某个特定阶段时被触发的,即在第一次链转移后不久。
通过多种方法,我们确定了逆转录过程中诱导HIV-1衣壳蛋白(CA)壳层脱壳的一个时间点。我们提出脱壳在逆转录的第一次链转移之后开始。