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从污水处理厂分离出的新型河流栖皮氏杆菌及皮氏杆菌属(Stackebrandt等人,2009年)的修订描述

Piscinibacter defluvii sp. nov., isolated from a sewage treatment plant, and emended description of the genus Piscinibacter Stackebrandt et al. 2009.

作者信息

Cho Sang Hyun, Lee Hyo Jung, Jeon Che Ok

机构信息

Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2016 Nov;66(11):4839-4843. doi: 10.1099/ijsem.0.001438. Epub 2016 Aug 22.

DOI:10.1099/ijsem.0.001438
PMID:27550187
Abstract

A Gram-staining-negative, strictly aerobic bacterium, designated SH-1T, was isolated from activated sludge in Korea. Cells were motile rods with a single polar flagellum, showing oxidase-positive and catalase-negative activities. Growth was observed at 25-40 °C (optimum, 37 °C), pH 6.0-9.5 (optimum, pH 7.0) and with 0-0.5 % (w/v) NaCl (optimum, 0 %). Strain SH-1T contained summed feature 3 (comprising C16 : 1ω7c and/or C16 : 1ω6c), C16 : 0, C12 : 0, summed feature 8 (comprising C18 : 1ω7c and/or C18 : 1ω6c) and C10 : 0 3-OH as the major fatty acids and ubiquinone-8 as the sole isoprenoid quinone. Phosphatidylethanolamine was the major polar lipid, and diphosphatidylglycerol, phosphatidylglycerol, one aminophospholipid, one phospholipid, five unidentified aminolipids and two unidentified lipids were also detected as the minor polar lipids. The predominant polyamines were 2-hydroxyputrescine, cadaverine and putrescine. The DNA G+C content was 69.9 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain SH-1T formed a tight phyletic lineage with Piscinibacter aquaticus IMCC1728T with a 98.3 % sequence similarity. However, the DNA-DNA relatedness value between strain SH-1T and the type strain of P. aquaticus was 38.0±1.8 %. On the basis of phenotypic, chemotaxonomic and molecular properties, it is clear that strain SH-1T represents a novel species of the genus Piscinibacter, for which the name Piscinibacter defluvii sp. nov. is proposed. The type strain is SH-1T (=KACC 18594T=JCM 31230T). An emended description of the genus Piscinibacter is also proposed.

摘要

从韩国活性污泥中分离出一株革兰氏染色阴性、严格需氧的细菌,命名为SH-1T。细胞为具单根极生鞭毛的运动杆菌,氧化酶阳性,过氧化氢酶阴性。在25-40 °C(最适温度37 °C)、pH 6.0-9.5(最适pH 7.0)和0-0.5 %(w/v)NaCl(最适浓度0 %)条件下可生长。菌株SH-1T的主要脂肪酸包括特征性总和3(包含C16 : 1ω7c和/或C16 : 1ω6c)、C16 : 0、C12 : 0、特征性总和8(包含C18 : 1ω7c和/或C18 : 1ω6c)以及C10 : 0 3-OH,唯一的类异戊二烯醌为泛醌-8。磷脂酰乙醇胺是主要极性脂质,还检测到双磷脂酰甘油、磷脂酰甘油、一种氨基磷脂、一种磷脂、五种未鉴定的氨基脂质和两种未鉴定的脂质作为次要极性脂质。主要的多胺为2-羟基腐胺、尸胺和腐胺。DNA G+C含量为69.9 mol%。基于16S rRNA基因序列的系统发育分析表明,菌株SH-1T与水生鱼源杆菌IMCC1728T形成紧密的系统发育分支,序列相似性为98.3 %。然而,菌株SH-1T与水生鱼源杆菌模式菌株之间的DNA-DNA杂交值为38.0±1.8 %。基于表型、化学分类和分子特性,很明显菌株SH-1T代表鱼源杆菌属的一个新物种,为此提出名为Piscinibacter defluvii sp. nov.的新名称。模式菌株为SH-1T(=KACC 18594T=JCM 31230T)。还提出了鱼源杆菌属的修订描述。

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引用本文的文献

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