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河口脱氮副球菌,一种从潮滩中分离得到的海洋细菌,对 2011 年 Foesel 等人描述的脱氮副球菌属进行了修正。

Defluviimonas aestuarii sp. nov., a marine bacterium isolated from a tidal flat, and emended description of the genus Defluviimonas Foesel et al. 2011.

机构信息

Department of Life Science & Research Center for Biomolecules and Biosystems, Chung-Ang University, Seoul 156-756, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Aug;63(Pt 8):2895-2900. doi: 10.1099/ijs.0.048389-0. Epub 2013 Jan 18.

Abstract

A novel Gram-staining-negative, strictly aerobic bacterium, designated BS14(T), was isolated from a marine tidal flat of the South Sea in Korea. Colonies were opaque, white, smooth and circular on marine agar. Cells were moderately halophilic, non-motile rods showing catalase- and oxidase-positive reactions. Growth of strain BS14(T) was observed at 5-40 °C (optimum: 30 °C), pH 6.5-9.5 (optimum: 7.0-7.5) and 0-10 % (w/v) NaCl (optimum: 1-1.5 %). The G+C content of the genomic DNA was 61.6 mol%. Strain BS14(T) contained ubiquinone-10 (Q-10) as the sole respiratory quinone and summed feature 8 (comprising C18 : 1ω7c and/or C18 : 1ω6c), C18 : 0 3-OH, C10 : 0 3-OH and C18 : 0 as the major fatty acids. The polar lipid pattern comprised phosphatidylethanolamine, diphosphatidylglycerol, an unidentified aminolipid, an unidentified phospholipid and an unidentified polar lipid. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain BS14(T) formed a tight phylogenetic lineage with Defluviimonas denitrificans D9-3(T) with a bootstrap value of 100 %. The 16S rRNA gene sequence similarity between strain BS14(T) and D. denitrificans D9-3(T) was 97.4 % and their DNA-DNA relatedness was 19.1 ± 3.6 %. Based on the phenotypic and genotypic studies, strain BS14(T) represents a novel species of the genus Defluviimonas, for which the name Defluviimonas aestuarii sp. nov. is proposed. The type strain is BS14(T) (= KACC 16442(T) = JCM 18630(T)). An emended description of the genus Defluviimonas Foesel et al. 2011 is also proposed.

摘要

一株新的革兰氏阴性、严格需氧细菌,被命名为 BS14(T),从韩国南海的一个海洋潮间带中分离得到。在海洋琼脂上,菌落不透明、白色、光滑且呈圆形。细胞中度嗜盐,无动力杆状,呈过氧化氢酶和氧化酶阳性反应。BS14(T) 菌株的生长温度为 5-40°C(最佳温度为 30°C),pH 值为 6.5-9.5(最佳 pH 值为 7.0-7.5),盐度为 0-10%(w/v)(最佳盐度为 1-1.5%)。基因组 DNA 的 G+C 含量为 61.6mol%。BS14(T) 菌株含有泛醌-10(Q-10)作为唯一的呼吸醌,并含有特征脂肪酸 8(包含 C18:1ω7c 和/或 C18:1ω6c)、C18:0 3-OH、C10:0 3-OH 和 C18:0。极性脂类图谱由磷脂酰乙醇胺、双磷脂酰甘油、一种未鉴定的胺脂、一种未鉴定的磷脂和一种未鉴定的极性脂类组成。基于 16S rRNA 基因序列的系统发育分析表明,BS14(T) 菌株与脱氮副球菌 D9-3(T) 形成了一个紧密的系统发育分支,置信度为 100%。BS14(T) 菌株与 D. denitrificans D9-3(T) 的 16S rRNA 基因序列相似度为 97.4%,其 DNA-DNA 同源性为 19.1±3.6%。基于表型和基因型研究,BS14(T) 菌株代表脱氮副球菌属的一个新种,因此建议将其命名为河口脱氮副球菌 Defluviimonas aestuarii sp. nov.。其模式菌株为 BS14(T)(=KACC 16442(T)=JCM 18630(T))。还提出了 Foesel 等人于 2011 年对脱氮副球菌属的修订描述。

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