Jeong Hye Im, Jin Hyun Mi, Jeon Che Ok
Department of Life Science, Chung-Ang University, Seoul 156-756, Republic of Korea.
Int J Syst Evol Microbiol. 2015 Nov;65(11):4191-4195. doi: 10.1099/ijsem.0.000561. Epub 2015 Aug 25.
A Gram-staining-negative, aerobic and moderately halophilic bacterium, designated strain NS6T, was isolated from sea-tidal-flat sediment of the South Sea in Korea. Cells were motile rods with a single flagellum showing positive catalase and oxidase activities. Strain NS6T grew at 15-40 °C (optimum, 30 °C), at pH 6.0-9.0 (optimum, pH 7.0-7.5) and in the presence of 1-5 % (w/v) NaCl (optimum, 2 %). Ubiquinone-10 was identified as the only isoprenoid quinone and summed feature 8 (comprising C18 : 1ω7c/ω6c), C19 : 0 cyclo ω8c, C16 : 0 and C10 : 0 3-OH were the major fatty acids. Strain NS6T contained phosphatidylglycerol, sulfoquinovosyldiacylglycerol, an unidentified amino lipid and an unidentified lipid as the major polar lipids. An unidentified phospholipid and three unidentified lipids were also detected as the minor polar lipids. The G+C content of the genomic DNA was 64.5 mol%. Strain NS6T was most closely related to Confluentimicrobium lipolyticum SSK1-4T with a 96.8 % 16S rRNA gene sequence similarity, and the phylogenetic analysis based on 16S rRNA gene sequences showed that strain NS6T formed a tight phylogenetic lineage with C. lipolyticum SSK1-4T. The physiological, chemotaxonomic and phylogenetic properties suggest that strain NS6T represents a novel species of the genus Confluentimicrobium, for which the name Confluentimicrobium naphthalenivorans sp. nov. is proposed. The type strain is NS6T ( = KCTC 18418T = JCM 30828T). An emended description of the genus Confluentimicrobium is also proposed.
从韩国南海的潮滩沉积物中分离出一株革兰氏染色阴性、需氧且中度嗜盐的细菌,命名为NS6T菌株。细胞为具单根鞭毛的能动杆菌,过氧化氢酶和氧化酶活性呈阳性。NS6T菌株在15-40 °C(最适温度30 °C)、pH 6.0-9.0(最适pH 7.0-7.5)以及1-5%(w/v)NaCl(最适浓度2%)的条件下生长。泛醌-10被鉴定为唯一的类异戊二烯醌,主要脂肪酸为总和特征8(包含C18 : 1ω7c/ω6c)、C19 : 0环ω8c、C16 : 0和C10 : 0 3-OH。NS6T菌株含有磷脂酰甘油、磺基喹喔啉二酰基甘油、一种未鉴定的氨基脂质和一种未鉴定的脂质作为主要极性脂质。还检测到一种未鉴定的磷脂和三种未鉴定的脂质作为次要极性脂质。基因组DNA的G+C含量为64.5 mol%。NS6T菌株与解脂融合微菌SSK1-4T关系最为密切,16S rRNA基因序列相似性为96.8%,基于16S rRNA基因序列的系统发育分析表明,NS6T菌株与解脂融合微菌SSK1-4T形成了紧密的系统发育谱系。生理、化学分类和系统发育特性表明,NS6T菌株代表融合微菌属的一个新物种,为此提出新名称萘降解融合微菌(Confluentimicrobium naphthalenivorans sp. nov.)。模式菌株为NS6T(=KCTC 18418T=JCM 30828T)。同时还提出了融合微菌属的修订描述。