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脂肪烃降解菌潮汐滩涂嗜冷杆菌新种(Aliiglaciecola aliphaticivorans sp. nov.),从潮间带分离得到,并对Jean等人于2013年提出的嗜冷杆菌属(Aliiglaciecola)进行修订描述。

Aliiglaciecola aliphaticivorans sp. nov., an aliphatic hydrocarbon-degrading bacterium, isolated from a sea-tidal flat and emended description of the genus Aliiglaciecola Jean et al. 2013.

作者信息

Jin Hyun Mi, Jeong Hye Im, Jeon Che Ok

机构信息

Department of Life Science, Chung-Ang University, Seoul 156-756, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2015 May;65(Pt 5):1550-1555. doi: 10.1099/ijs.0.000133. Epub 2015 Feb 23.

Abstract

A Gram-stain-negative heterotrophic bacterium, designated GSD6(T), capable of growth on aliphatic hydrocarbons as a sole carbon and energy source, was isolated from sea-tidal flat sediment of the Yellow Sea, South Korea. Cells were facultatively aerobic, catalase- and oxidase-positive, motile rods with a single polar flagellum. Growth of strain GSD6(T) was observed at 4-37 °C (optimum 30 °C), at pH 5.5-9.0 (optimum pH 6.5-7.5) and in the presence of 1-9% (w/v) NaCl (optimum 2%). Strain GSD6(T) contained ubiquinone-8 (Q-8) as the sole isoprenoid quinone and summed feature 3 (comprising C16 : 1ω7c and/or iso-C15 : 0 2-OH), C16 : 0, C18 : 1ω7c, C17  : 0 10-methyl and C17 : 1ω8c as the major fatty acids. Phosphatidylethanolamine and phosphatidylglycerol were identified as the major polar lipids. The G+C content of the genomic DNA was 44.6 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain GSD6(T) formed a phylogenetic lineage with members of the genus Aliiglaciecola . Strain GSD6(T) was most closely related to Aliiglaciecola lipolytica E3(T) with a 16S rRNA gene sequence similarity of 97.4%, but their DNA-DNA hybridization value was 39.1 ± 7.1%. On the basis of phenotypic, chemotaxonomic and molecular features, strain GSD6(T) represents a novel species of the genus Aliiglaciecola , for which the name Aliiglaciecola aliphaticivorans sp. nov. is proposed. The type strain is GSD6(T) ( =KACC 18129(T) =JCM 30133(T)). An emended description of the genus Aliiglaciecola is also proposed.

摘要

从韩国黄海的潮滩沉积物中分离出一株革兰氏染色阴性的异养细菌,命名为GSD6(T),它能够以脂肪族烃作为唯一的碳源和能源生长。细胞为兼性需氧型,过氧化氢酶和氧化酶呈阳性,是具有单根极生鞭毛的能动杆菌。在4-37℃(最适温度30℃)、pH 5.5-9.0(最适pH 6.5-7.5)以及1-9%(w/v)NaCl(最适2%)存在的条件下观察到菌株GSD6(T)的生长。菌株GSD6(T)含有泛醌-8(Q-8)作为唯一的类异戊二烯醌,主要脂肪酸为特征性总和3(包含C16 : 1ω7c和/或异-C15 : 0 2-OH)、C16 : 0、C18 : 1ω7c、C17  : 0 10-甲基和C17 : 1ω8c。磷脂酰乙醇胺和磷脂酰甘油被鉴定为主要的极性脂类。基因组DNA的G+C含量为44.6 mol%。基于16S rRNA基因序列的系统发育分析表明,菌株GSD6(T)与Aliiglaciecola属的成员形成一个系统发育分支。菌株GSD6(T)与解脂Aliiglaciecola E3(T)关系最为密切,16S rRNA基因序列相似性为97.4%,但其DNA-DNA杂交值为39.1 ± 7.1%。基于表型、化学分类和分子特征,菌株GSD6(T)代表Aliiglaciecola属的一个新物种,为此提出名为Aliiglaciecola aliphaticivorans sp. nov.。模式菌株为GSD6(T)(=KACC 18129(T)=JCM 30133(T))。同时还提出了对Aliiglaciecola属的修订描述。

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