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旱季限制半干旱根际系统中的细菌系统发育多样性。

Dry Season Constrains Bacterial Phylogenetic Diversity in a Semi-Arid Rhizosphere System.

作者信息

Taketani Rodrigo Gouvêa, Lançoni Milena Duarte, Kavamura Vanessa Nessner, Durrer Ademir, Andreote Fernando Dini, Melo Itamar Soares

机构信息

Laboratory of Environmental Microbiology, Embrapa Environment, Brazilian Agricultural Research Corporation-EMBRAPA, Rodovia SP-340 km 127,5, Jaguariúna, SP, 13820-000, Brazil.

Soil Science Department, Escola Superior de Agricultura "Luiz de Queiroz", University of São Paulo, Piracicaba, SP, Brazil.

出版信息

Microb Ecol. 2017 Jan;73(1):153-161. doi: 10.1007/s00248-016-0835-4. Epub 2016 Aug 24.

Abstract

The rhizosphere is viewed as a deterministic environment led by the interaction between plants and microorganisms. In the case of semi-arid plants, this interaction is strengthened by the harshness of the environment. We tested the hypothesis that dry season represents a constraint on the bacterial diversity of the rhizosphere from semi-arid plants. To accomplish this, we sampled two leguminous species at five locations during the dry and rainy seasons in the Caatinga biome and characterised bacterial community structures using qPCR and 16S rRNA sequencing. We found that the main differences between seasons were due to reduced phylogenetic diversity caused by dryness. Variation partitioning indicated that environmental characteristics significant impacts in β-diversity. Additionally, distance decay relationship and taxa area relationship indicate a higher spatial turnover at the rainy season. During the dry season, decreased bacterial abundance is likely due to the selection of resistant or resilient microorganisms; with the return of the rain, the sensitive populations start to colonise the rhizosphere by a process that is strongly influenced by environmental characteristics. Thus, we propose that the reduction of PD and strong influence of environmental parameters on the assemblage of these communities make them prone to functional losses caused by climatic disturbances.

摘要

根际被视为一个由植物与微生物相互作用主导的确定性环境。对于半干旱地区的植物而言,这种相互作用因环境的恶劣性而得到加强。我们检验了这样一个假设:旱季对半干旱植物根际细菌多样性构成一种限制。为实现这一目标,我们在卡廷加生物群落的旱季和雨季期间,于五个地点对两种豆科植物进行了采样,并使用定量聚合酶链反应(qPCR)和16S核糖体RNA(rRNA)测序对细菌群落结构进行了表征。我们发现,季节之间的主要差异是由于干旱导致系统发育多样性降低所致。变异分解表明,环境特征对β多样性有显著影响。此外,距离衰减关系和分类单元-面积关系表明,雨季的空间周转率更高。在旱季,细菌丰度下降可能是由于对抗性或有复原力的微生物进行了选择;随着降雨的回归,敏感种群开始通过一个受环境特征强烈影响的过程在根际定殖。因此,我们提出,系统发育多样性的降低以及环境参数对这些群落组合的强烈影响,使它们容易因气候干扰而导致功能丧失。

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