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植酸酶转基因玉米及其非转基因同基因品种叶片的比较蛋白质组学

Comparative Proteomics of Leaves from Phytase-Transgenic Maize and Its Non-transgenic Isogenic Variety.

作者信息

Tan Yanhua, Yi Xiaoping, Wang Limin, Peng Cunzhi, Sun Yong, Wang Dan, Zhang Jiaming, Guo Anping, Wang Xuchu

机构信息

College of Agriculture, Hainan UniversityHaikou, China; Key Laboratory of Biology and Genetic Resources for Tropical Crops, Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural SciencesHaikou, China.

Key Laboratory of Biology and Genetic Resources for Tropical Crops, Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences Haikou, China.

出版信息

Front Plant Sci. 2016 Aug 17;7:1211. doi: 10.3389/fpls.2016.01211. eCollection 2016.

Abstract

To investigate unintended effects in genetically modified crops (GMCs), a comparative proteomic analysis between the leaves of the phytase-transgenic maize and the non-transgenic plants was performed using two-dimensional gel electrophoresis and mass spectrometry. A total of 57 differentially expressed proteins (DEPs) were successfully identified, which represents 44 unique proteins. Functional classification of the identified proteins showed that these DEPs were predominantly involved in carbohydrate transport and metabolism category, followed by post-translational modification. KEGG pathway analysis revealed that most of the DEPs participated in carbon fixation in photosynthesis. Among them, 15 proteins were found to show protein-protein interactions with each other, and these proteins were mainly participated in glycolysis and carbon fixation. Comparison of the changes in the protein and tanscript levels of the identified proteins showed that most proteins had a similar pattern of changes between proteins and transcripts. Our results suggested that although some significant differences were observed, the proteomic patterns were not substantially different between the leaves of the phytase-transgenic maize and the non-transgenic isogenic type. Moreover, none of the DEPs was identified as a new toxic protein or an allergenic protein. The differences between the leaf proteome might be attributed to both genetic modification and hybrid influence.

摘要

为了研究转基因作物(GMC)的非预期效应,利用二维凝胶电泳和质谱技术对植酸酶转基因玉米叶片与非转基因植物叶片进行了比较蛋白质组学分析。共成功鉴定出57种差异表达蛋白(DEP),代表44种独特蛋白。对鉴定出的蛋白进行功能分类表明,这些DEP主要参与碳水化合物运输和代谢类别,其次是翻译后修饰。KEGG通路分析显示,大多数DEP参与光合作用中的碳固定。其中,发现15种蛋白相互之间存在蛋白质-蛋白质相互作用,这些蛋白主要参与糖酵解和碳固定。对鉴定出的蛋白的蛋白质和转录水平变化进行比较表明,大多数蛋白在蛋白质和转录本之间具有相似的变化模式。我们的结果表明,虽然观察到了一些显著差异,但植酸酶转基因玉米叶片与非转基因同基因类型叶片的蛋白质组模式没有实质性差异。此外,没有一个DEP被鉴定为新的毒性蛋白或过敏原蛋白。叶片蛋白质组之间的差异可能归因于基因改造和杂种影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/465a/4987384/1ee21c8a95e4/fpls-07-01211-g0001.jpg

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