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从有机饲养鸡粪便中分离出的三种产芽孢细菌的基因组序列

Genome Sequences of Three Spore-Forming Bacteria Isolated from the Feces of Organically Raised Chickens.

作者信息

Kennedy Victoria, Van Laar Tricia A, Aleru Omoshola, Thomas Michael, Ganci Michelle, Rawat Mamta

机构信息

Department of Animal Science, California State University, Fresno, Fresno, California, USA.

Department of Biology, California State University, Fresno, Fresno, California, USA.

出版信息

Genome Announc. 2016 Sep 1;4(5):e00880-16. doi: 10.1128/genomeA.00880-16.

DOI:10.1128/genomeA.00880-16
PMID:27587809
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5009966/
Abstract

Antibiotic feed supplements have been implicated in the rise of multidrug-resistant bacteria. An alternative to antibiotics is probiotics. Here, we report the genome sequences of two Bacillus and one Solibacillus species, all spore-forming, Gram-positive bacteria, isolated from the feces organically raised chicken feces, with potential to serve as probiotics.

摘要

抗生素饲料添加剂被认为与多重耐药菌的增加有关。益生菌是抗生素的一种替代品。在此,我们报告了从有机饲养的鸡粪便中分离出的两种芽孢杆菌属和一种类芽孢杆菌属细菌的基因组序列,这些都是形成芽孢的革兰氏阳性菌,具有作为益生菌的潜力。

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本文引用的文献

1
Complete Genomes of Bacillus coagulans S-lac and Bacillus subtilis TO-A JPC, Two Phylogenetically Distinct Probiotics.凝结芽孢杆菌S-lac和枯草芽孢杆菌TO-A JPC的全基因组,两种系统发育不同的益生菌。
PLoS One. 2016 Jun 3;11(6):e0156745. doi: 10.1371/journal.pone.0156745. eCollection 2016.
2
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data.A5-miseq:一种用于从Illumina MiSeq数据组装微生物基因组的更新流程。
Bioinformatics. 2015 Feb 15;31(4):587-9. doi: 10.1093/bioinformatics/btu661. Epub 2014 Oct 22.
3
Food animals and antimicrobials: impacts on human health.食用动物与抗菌药物:对人类健康的影响。
Clin Microbiol Rev. 2011 Oct;24(4):718-33. doi: 10.1128/CMR.00002-11.
4
Bacillus subtilis spores germinate in the chicken gastrointestinal tract.枯草芽孢杆菌孢子在鸡的胃肠道中萌发。
Appl Environ Microbiol. 2008 Aug;74(16):5254-8. doi: 10.1128/AEM.00580-08. Epub 2008 Jun 27.
5
The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
6
History of the use of antibiotic as growth promoters in European poultry feeds.抗生素在欧洲家禽饲料中作为生长促进剂的使用历史。
Poult Sci. 2007 Nov;86(11):2466-71. doi: 10.3382/ps.2007-00249.
7
The use of bacterial spore formers as probiotics.将产芽孢细菌用作益生菌。
FEMS Microbiol Rev. 2005 Sep;29(4):813-35. doi: 10.1016/j.femsre.2004.12.001. Epub 2004 Dec 16.