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氧化还原化学显式溶剂模型中的绝热近似

Adiabatic Approximation in Explicit Solvent Models of RedOx Chemistry.

作者信息

Vaissier Valérie, Van Voorhis Troy

机构信息

Department of Chemistry, Massachusetts Institute of Technology , 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States.

出版信息

J Chem Theory Comput. 2016 Oct 11;12(10):5111-5116. doi: 10.1021/acs.jctc.6b00746. Epub 2016 Sep 13.

Abstract

We propose a calculation scheme that accelerates QM/MM simulations of solvated systems. This new approach is based on the adiabatic approximation whereby the solute degrees of freedom are separated from those of the solvent. More specifically, we assume that the solute electron density remains constant with respect to the relaxation of the solvent molecules. This allows us to achieve a dramatic speed-up of QM/MM calculations by discarding the slow self-consistent field cycle. We test this method by applying it to the calculation of the redox potential of aqueous transition metal ions. The root-mean-square deviation (RMSD) between the full solvation and adiabatic approximation is only 0.17 V. We find a RMSD from experimental values of 0.32 V for the adiabatic approximation as compared to 0.31 V for the full solvation model, so that the two methods are of essentially the same accuracy. Meanwhile, the adiabatic calculations are up to 10 times faster than the full solvation calculations, meaning that the method proposed here reduces the cost of QM/MM calculations while retaining the accuracy.

摘要

我们提出了一种加速溶剂化体系量子力学/分子力学(QM/MM)模拟的计算方案。这种新方法基于绝热近似,即溶质自由度与溶剂自由度分离。更具体地说,我们假设溶质电子密度相对于溶剂分子的弛豫保持不变。这使我们能够通过舍弃缓慢的自洽场循环,显著加快QM/MM计算速度。我们将此方法应用于计算水相过渡金属离子的氧化还原电位来进行测试。完全溶剂化与绝热近似之间的均方根偏差(RMSD)仅为0.17V。我们发现绝热近似与实验值的RMSD为0.32V,而完全溶剂化模型为0.31V,因此这两种方法的精度基本相同。同时,绝热计算比完全溶剂化计算快达10倍,这意味着这里提出的方法在保持精度的同时降低了QM/MM计算的成本。

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