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不同大鼠脑区中Parkin亚型表达的蛋白质组学分析

Proteomic Analysis of Parkin Isoforms Expression in Different Rat Brain Areas.

作者信息

D'Amico Agata Grazia, Maugeri Grazia, Reitano Rita, Cavallaro Sebastiano, D'Agata Velia

机构信息

San Raffaele Open University of Rome, Rome, Italy.

Section of Human Anatomy and Histology, Department of Biomedical and Biotechnological Sciences, University of Catania, Via S.Sofia, 87, 95123, Catania, Italy.

出版信息

Protein J. 2016 Oct;35(5):354-362. doi: 10.1007/s10930-016-9679-5.

DOI:10.1007/s10930-016-9679-5
PMID:27601173
Abstract

PARK2 gene's mutations are related to the familial form of juvenile Parkinsonism, also known as the autosomic recessive juvenile Parkinsonism. This gene encodes for parkin, a 465-amino acid protein. To date, a large number of parkin isoforms, generated by an alternative splicing mechanism, have been described. Currently, Gene Bank lists 27 rat PARK2 transcripts, which matches to 20 exclusive parkin alternative splice variants. Despite the existence of these isoforms, most of the studies carried out so far, have been focused only on the originally cloned parkin. In this work we have analyzed the expression profile of parkin isoforms in some rat brain areas including prefrontal cortex, hippocampus, substantia nigra and cerebellum. To discriminate among these isoforms, we detected their localization through the use of two antibodies that are able to identify different domains of the parkin canonical sequence. Our analysis has revealed that at least fourteen parkin isoforms are expressed in rat brain with a various distribution in the regions analyzed. Our study might help to elucidate the pathophysiological role of these proteins in the central nervous system.

摘要

PARK2基因的突变与青少年帕金森病的家族形式有关,也称为常染色体隐性青少年帕金森病。该基因编码一种由465个氨基酸组成的蛋白质——帕金蛋白。迄今为止,已经描述了大量由可变剪接机制产生的帕金蛋白异构体。目前,基因库列出了27种大鼠PARK2转录本,它们与20种独特的帕金蛋白可变剪接变体相对应。尽管存在这些异构体,但迄今为止进行的大多数研究仅集中在最初克隆的帕金蛋白上。在这项工作中,我们分析了帕金蛋白异构体在大鼠的一些脑区中的表达谱,这些脑区包括前额叶皮质、海马体、黑质和小脑。为了区分这些异构体,我们通过使用两种能够识别帕金蛋白标准序列不同结构域的抗体来检测它们的定位。我们的分析表明,至少有14种帕金蛋白异构体在大鼠脑中表达,并且在所分析的区域中分布各异。我们的研究可能有助于阐明这些蛋白质在中枢神经系统中的病理生理作用。

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Proteomic Analysis of Parkin Isoforms Expression in Different Rat Brain Areas.不同大鼠脑区中Parkin亚型表达的蛋白质组学分析
Protein J. 2016 Oct;35(5):354-362. doi: 10.1007/s10930-016-9679-5.
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Alternative splicing generates different parkin protein isoforms: evidences in human, rat, and mouse brain.可变剪接产生不同的帕金森蛋白异构体:来自人类、大鼠和小鼠大脑的证据。
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14-3-3eta is a novel regulator of parkin ubiquitin ligase.14-3-3η是帕金泛素连接酶的一种新型调节因子。
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Identification and distribution of Parkin in rat brain.大鼠脑中帕金蛋白的鉴定与分布。
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Parkin expression in the adult mouse brain.
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Parkin is protective for substantia nigra dopamine neurons in a tau gene transfer neurodegeneration model.在tau基因转移神经退行性变模型中,帕金蛋白对黑质多巴胺能神经元具有保护作用。
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Hum Mutat. 2015 Aug;36(8):E2430-40. doi: 10.1002/humu.22803. Epub 2015 Jun 3.

引用本文的文献

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Genes (Basel). 2022 Mar 8;13(3):479. doi: 10.3390/genes13030479.
2
Single domain antibodies for the knockdown of cytosolic and nuclear proteins.用于敲低胞质和核蛋白的单域抗体。
Protein Sci. 2017 May;26(5):925-945. doi: 10.1002/pro.3154. Epub 2017 Mar 24.

本文引用的文献

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Expression profile of Wilms Tumor 1 (WT1) isoforms in undifferentiated and all-trans retinoic acid differentiated neuroblastoma cells.肾母细胞瘤1(WT1)亚型在未分化及全反式维甲酸分化的神经母细胞瘤细胞中的表达谱
Genes Cancer. 2016 Jan;7(1-2):47-58. doi: 10.18632/genesandcancer.94.
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Altered α-synuclein, parkin, and synphilin isoform levels in multiple system atrophy brains.多系统萎缩症患者大脑中α-突触核蛋白、帕金蛋白和突触结合蛋白异构体水平的改变。
J Neurochem. 2016 Jan;136(1):172-85. doi: 10.1111/jnc.13392. Epub 2015 Nov 11.
3
PACAP Modulates Expression of Hypoxia-Inducible Factors in Streptozotocin-Induced Diabetic Rat Retina.
垂体腺苷酸环化酶激活肽调节链脲佐菌素诱导的糖尿病大鼠视网膜中缺氧诱导因子的表达。
J Mol Neurosci. 2015 Dec;57(4):501-9. doi: 10.1007/s12031-015-0621-7. Epub 2015 Jul 23.
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Splicing: is there an alternative contribution to Parkinson's disease?剪接:它对帕金森病是否有其他作用?
Neurogenetics. 2015 Oct;16(4):245-63. doi: 10.1007/s10048-015-0449-x. Epub 2015 May 16.
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Alternative splicing generates different parkin protein isoforms: evidences in human, rat, and mouse brain.可变剪接产生不同的帕金森蛋白异构体:来自人类、大鼠和小鼠大脑的证据。
Biomed Res Int. 2014;2014:690796. doi: 10.1155/2014/690796. Epub 2014 Jul 16.
6
Inhibition of apoptotic Bax translocation to the mitochondria is a central function of parkin.抑制凋亡相关的Bax蛋白转位至线粒体是帕金蛋白的核心功能。
Cell Death Dis. 2014 Jul 3;5(7):e1313. doi: 10.1038/cddis.2014.278.
7
The prevalence of Parkinson's disease: a systematic review and meta-analysis.帕金森病的患病率:一项系统评价与荟萃分析
Mov Disord. 2014 Nov;29(13):1583-90. doi: 10.1002/mds.25945. Epub 2014 Jun 28.
8
Increasing the Coding Potential of Genomes Through Alternative Splicing: The Case of PARK2 Gene.通过可变剪接增加基因组的编码潜力:以PARK2基因为例。
Curr Genomics. 2014 Jun;15(3):203-16. doi: 10.2174/1389202915666140426003342.
9
Interplay between parkin and p53 governs a physiological homeostasis that is disrupted in Parkinson's disease and cerebral cancer.Parkin 和 p53 之间的相互作用控制着一种生理平衡,这种平衡在帕金森病和脑癌中被打破。
Neurodegener Dis. 2014;13(2-3):118-21. doi: 10.1159/000354075. Epub 2013 Sep 4.
10
A molecular explanation for the recessive nature of parkin-linked Parkinson's disease.帕金森病相关的 parkin 基因隐性遗传的分子解释。
Nat Commun. 2013;4:1983. doi: 10.1038/ncomms2983.