Medical Proteomics Unit, Office for Research and Development, Faculty of Medicine Siriraj Hospital; and Center for Research in Complex Systems Science (CRCSS), Mahidol University, Bangkok, Thailand.
Sci Rep. 2016 Sep 20;6:33756. doi: 10.1038/srep33756.
Changes in lipid levels/profiles can reflect health status and diseases. Urinary lipidomics, thus, has a great potential in clinical diagnostics/prognostics. Previously, only chloroform and methanol were used for extracting lipids from the urine. The present study aimed to optimize lipid extraction and examine differential lipid classes obtained by various extraction protocols. Urine samples were collected from eight healthy individuals and then pooled. Lipids were extracted by six solvent protocols, including (i) chloroform/methanol (1:1, v/v), (ii) chloroform/methanol (2:1, v/v), (iii) hexane/isopropanol (3:2, v/v), (iv) chloroform, (v) diethyl ether, and (vi) hexane. Lipid profiles of the six extracts were acquired by MALDI-TOF mass spectrometry (MS) and some lipid classes were verified by LIFT-TOF/TOF MS/MS. The data revealed that phosphatidylglycerol (PG) and phosphatidylinositol (PI) could be detected by all six protocols. However, phosphatidylcholine (PC) and sphingomyelin (SM) were detectable only by protocols (i)-(iv), whereas phosphatidylserine (PS) was detectable only by protocols (iii)-(vi), and phosphatidylethanolamine (PE) was detectable only by protocols (v)-(vi). In summary, we have demonstrated differential lipidome profiles yielded by different extraction protocols. These data can serve as an important source for selection of an appropriate extraction method for further highly focused studies on particular lipid classes in the human urine.
脂质水平/谱的变化可以反映健康状况和疾病。因此,尿脂质组学在临床诊断/预后中有很大的潜力。以前,只有氯仿和甲醇用于从尿液中提取脂质。本研究旨在优化脂质提取,并检查不同提取方案获得的差异脂质类。从 8 名健康个体收集尿液样本并混合。用六种溶剂方案提取脂质,包括(i)氯仿/甲醇(1:1,v/v),(ii)氯仿/甲醇(2:1,v/v),(iii)正己烷/异丙醇(3:2,v/v),(iv)氯仿,(v)乙醚,和(vi)正己烷。用 MALDI-TOF 质谱(MS)获得六种提取物的脂质谱,并通过 LIFT-TOF/TOF MS/MS 验证一些脂质类。数据显示,所有六种方案均可检测到磷脂酰甘油(PG)和磷脂酰肌醇(PI)。然而,磷脂酰胆碱(PC)和鞘磷脂(SM)仅可通过方案(i)-(iv)检测到,而磷脂酰丝氨酸(PS)仅可通过方案(iii)-(vi)检测到,而磷脂酰乙醇胺(PE)仅可通过方案(v)-(vi)检测到。总之,我们已经证明了不同提取方案产生的差异脂质组学图谱。这些数据可以作为选择适当提取方法的重要依据,以进一步针对人类尿液中特定脂质类进行高度集中的研究。