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适体侧向流分析结合重组酶聚合酶扩增和长尾引物用于 β-伴大豆球蛋白的超灵敏检测

Aptamer Lateral Flow Assays for Ultrasensitive Detection of β-Conglutin Combining Recombinase Polymerase Amplification and Tailed Primers.

机构信息

Nanobiotechnology and Bioanalysis group, Department of Chemical Engineering, Universitat Rovira I Virgili , 43007 Tarragona, Spain.

Institute of Cellular Medicine, Diagnostic and Therapeutic Technologies Group, Newcastle University , Newcastle upon Tyne, NE2 4HH, U.K.

出版信息

Anal Chem. 2016 Nov 1;88(21):10701-10709. doi: 10.1021/acs.analchem.6b03256. Epub 2016 Oct 18.

Abstract

In this work, different methodologies were evaluated in search of robust, simple, rapid, ultrasensitive, and user-friendly lateral flow aptamer assays. In one approach, we developed a competitive based lateral flow aptamer assay, in which β-conglutin immobilized on the test line of a nitrocellulose membrane and β-conglutin in the test sample compete for binding to AuNP labeled aptamer. The control line exploits an immobilized DNA probe complementary to the labeled aptamer, forcing displacement of the aptamer from the β-conglutin-aptamer complex. In a second approach, the competition for aptamer binding takes place off-strip, and following competition, aptamer bound to the immobilized β-conglutin is eluted and used as a template for isothermal recombinase polymerase amplification, exploiting tailed primers, resulting in an amplicon of a duplex flanked by single stranded DNA tails. The amplicon is rapidly and quantitatively detected using a nucleic acid lateral flow with an immobilized capture probe and a gold nanoparticle labeled reporter probe. The competitive lateral flow is completed in just 5 min, achieving a detection limit of 55 pM (1.1 fmol), and the combined competitive-amplification lateral flow requires just 30 min, with a detection limit of 9 fM (0.17 amol).

摘要

在这项工作中,我们评估了不同的方法,以寻找稳健、简单、快速、超灵敏且易于使用的侧向流动适体分析方法。在一种方法中,我们开发了一种基于竞争的侧向流动适体分析方法,其中β-伴球蛋白固定在硝酸纤维素膜的测试线上,而测试样品中的β-伴球蛋白与 AuNP 标记的适体竞争结合。控制线利用与标记适体互补的固定化 DNA 探针,迫使适体从β-伴球蛋白-适体复合物中置换出来。在第二种方法中,竞争适体结合发生在非条带位置,竞争后,与固定化β-伴球蛋白结合的适体被洗脱,并用作等温重组酶聚合扩增的模板,利用长尾引物,导致由双链侧翼的单链 DNA 尾巴组成的扩增子。使用带有固定化捕获探针和金纳米颗粒标记报告探针的核酸侧向流动来快速定量检测扩增子。竞争侧向流动仅需 5 分钟即可完成,检测限为 55 pM(1.1 fmol),而组合竞争-扩增侧向流动仅需 30 分钟,检测限为 9 fM(0.17 amol)。

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