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细菌群落中的代谢互补:必要条件与最优性

Metabolic Complementation in Bacterial Communities: Necessary Conditions and Optimality.

作者信息

Mori Matteo, Ponce-de-León Miguel, Peretó Juli, Montero Francisco

机构信息

Departamento de Bioquímica y Biología Molecular I, Facultad de Ciencias Químicas, Universidad Complutense de MadridMadrid, Spain; Department of Physics, University of California, San DiegoLa Jolla, CA, USA.

Departamento de Bioquímica y Biología Molecular I, Facultad de Ciencias Químicas, Universidad Complutense de Madrid Madrid, Spain.

出版信息

Front Microbiol. 2016 Oct 7;7:1553. doi: 10.3389/fmicb.2016.01553. eCollection 2016.

Abstract

Bacterial communities may display metabolic complementation, in which different members of the association partially contribute to the same biosynthetic pathway. In this way, the end product of the pathway is synthesized by the community as a whole. However, the emergence and the benefits of such complementation are poorly understood. Herein, we present a simple model to analyze the metabolic interactions among bacteria, including the host in the case of endosymbiotic bacteria. The model considers two cell populations, with both cell types encoding for the same linear biosynthetic pathway. We have found that, for metabolic complementation to emerge as an optimal strategy, both product inhibition and large permeabilities are needed. In the light of these results, we then consider the patterns found in the case of tryptophan biosynthesis in the endosymbiont consortium hosted by the aphid . Using computed physicochemical properties of metabolites of this and other biosynthetic pathways, we verified that the splitting point of the pathway corresponds to the most permeable intermediate.

摘要

细菌群落可能表现出代谢互补性,即群落中的不同成员对同一条生物合成途径做出部分贡献。通过这种方式,该途径的终产物由整个群落合成。然而,这种互补性的出现及其益处却鲜为人知。在此,我们提出一个简单模型来分析细菌之间的代谢相互作用,包括内共生细菌情况下的宿主。该模型考虑两个细胞群体,两种细胞类型都编码同一条线性生物合成途径。我们发现,要使代谢互补作为一种最优策略出现,产物抑制和高通透性都是必需的。鉴于这些结果,我们接着考虑了在蚜虫所携带的内共生体群落中色氨酸生物合成的情况所发现的模式。利用该生物合成途径及其他生物合成途径代谢物的计算物理化学性质,我们验证了该途径的分裂点对应于通透性最高的中间产物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/5054487/1945edafa790/fmicb-07-01553-g0001.jpg

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