Porebski Benjamin T, Buckle Ashley M
Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology, Faculty of Medicine, Monash University, Clayton, Victoria 3800, Australia Medical Research Council Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge CB2 0QH, UK.
Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology, Faculty of Medicine, Monash University, Clayton, Victoria 3800, Australia
Protein Eng Des Sel. 2016 Jul;29(7):245-51. doi: 10.1093/protein/gzw015. Epub 2016 Jun 5.
A popular and successful strategy in semi-rational design of protein stability is the use of evolutionary information encapsulated in homologous protein sequences. Consensus design is based on the hypothesis that at a given position, the respective consensus amino acid contributes more than average to the stability of the protein than non-conserved amino acids. Here, we review the consensus design approach, its theoretical underpinnings, successes, limitations and challenges, as well as providing a detailed guide to its application in protein engineering.
在蛋白质稳定性的半理性设计中,一种流行且成功的策略是利用同源蛋白质序列中蕴含的进化信息。一致性设计基于这样一种假设:在给定位置,相应的一致性氨基酸对蛋白质稳定性的贡献比非保守氨基酸的平均贡献更大。在此,我们综述了一致性设计方法、其理论基础、成功之处、局限性和挑战,并提供了一份关于其在蛋白质工程中应用的详细指南。