Sanchez-Pulido Luis, Perez Laurent, Kuhn Steffen, Vernos Isabelle, Andrade-Navarro Miguel A
MRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, The University of Edinburgh, Western General Hospital, Crewe Road, Edinburgh, EH4 2XU, UK.
Center for Genomic Regulation, C/ Dr Aiguader 88, 08003, Barcelona, Spain.
BMC Struct Biol. 2016 Oct 26;16(1):17. doi: 10.1186/s12900-016-0070-8.
TPX2 (Targeting Protein for Xklp2) is essential for spindle assembly, activation of the mitotic kinase Aurora A and for triggering microtubule nucleation. Homologs of TPX2 in Chordata and plants were previously identified. Currently, proteins of the TPX2 family have little structural information and only small parts are covered by defined protein domains.
We have used computational sequence analyses and structural predictions of proteins of the TPX2 family, supported with Circular Dichroism (CD) measurements.
Here, we report our finding that the C-terminal domain of TPX2, which is responsible of its microtubule nucleation capacity and is conserved in all members of the family, is actually formed by tandem repeats, covering well above 2/3 of the protein. We propose that this region forms a flexible solenoid involved in protein-protein interactions. Structural prediction and molecular modeling, combined with Circular Dichroism (CD) measurements reveal a predominant alpha-helical content. Furthermore, we identify full length homologs in fungi and shorter homologs with a different domain organization in diptera (including a paralogous expansion in Drosophila).
Our results, represent the first computational and biophysical analysis of the TPX2 proteins family and help understand the structure and evolution of this conserved protein family to direct future structural studies.
TPX2(Xklp2靶向蛋白)对于纺锤体组装、有丝分裂激酶Aurora A的激活以及触发微管成核至关重要。此前已鉴定出脊索动物和植物中TPX2的同源物。目前,TPX2家族蛋白的结构信息很少,只有小部分被确定的蛋白结构域覆盖。
我们使用了计算序列分析和TPX2家族蛋白的结构预测,并辅以圆二色性(CD)测量。
在此,我们报告我们的发现,即TPX2的C末端结构域负责其微管成核能力,并且在该家族的所有成员中都是保守的,实际上是由串联重复序列形成的,覆盖了超过蛋白质的2/3。我们提出该区域形成一个参与蛋白质-蛋白质相互作用的柔性螺线管。结构预测和分子建模,结合圆二色性(CD)测量揭示了主要的α-螺旋含量。此外,我们在真菌中鉴定出全长同源物,在双翅目昆虫中鉴定出具有不同结构域组织的较短同源物(包括果蝇中的旁系同源物扩展)。
我们的结果代表了对TPX2蛋白家族的首次计算和生物物理分析,并有助于理解这个保守蛋白家族的结构和进化,以指导未来的结构研究。