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从油井和油藏上方表层土壤中分离出的两种嗜热栖热菌属菌株的基因组序列草图

Draft Genome Sequences of Two Geobacillus Species Strains, Isolated from Oil Wells and Surface Soil above Oil Pools.

作者信息

Kaunietis Arnoldas, de Jong Anne, Pranckutė Raminta, Buivydas Andrius, Kuipers Oscar P

机构信息

Molecular Genetics, University of Groningen, Groningen, The Netherlands.

Department of Microbiology and Biotechnology, Vilnius University, Vilnius, Lithuania.

出版信息

Genome Announc. 2016 Oct 20;4(5):e01129-16. doi: 10.1128/genomeA.01129-16.

DOI:10.1128/genomeA.01129-16
PMID:27795271
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5073258/
Abstract

Here, we present the draft genome sequences of two Geobacillus species strains isolated from oil wells and surface soil above oil pools in Lithuania.

摘要

在此，我们展示了从立陶宛油井及油藏上方表层土壤中分离出的两种嗜热栖热放线菌菌株的基因组序列草图。

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本文引用的文献

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BAGEL3: Automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.BAGEL3：用于自动识别编码细菌素和（非）杀菌型翻译后修饰肽的基因。
Nucleic Acids Res. 2013 Jul;41(Web Server issue):W448-53. doi: 10.1093/nar/gkt391. Epub 2013 May 15.
2
Lantibiotics from Geobacillus thermodenitrificans.来自嗜热脱硫杆菌的羊毛硫抗生素。
Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5241-6. doi: 10.1073/pnas.1116815109. Epub 2012 Mar 19.
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Velvet: algorithms for de novo short read assembly using de Bruijn graphs.《天鹅绒：使用德布鲁因图进行从头短读长拼接的算法》
Genome Res. 2008 May;18(5):821-9. doi: 10.1101/gr.074492.107. Epub 2008 Mar 18.
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The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
5
Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. th.嗜热需氧芽孢杆菌的分类学研究：地下嗜热栖热菌新属、新种及乌津嗜热栖热菌新种的描述，从石油储层分离，以及嗜热脂肪芽孢杆菌、热链芽孢杆菌、嗜热油芽孢杆菌、嗜碱芽孢杆菌、热脱硝芽孢杆菌转移至嗜热栖热菌属成为新组合嗜热脂肪栖热菌、嗜热链栖热菌等。
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